Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq133 86.0 5e-12
>seq133
Length=726431
Score = 86.0 bits (94), Expect = 5e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| || || ||||| || | || ||||| |||||||| ||||| |||| | |
Sbjct 170917 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACCATTACGCTCGAAGTGGAGTCCTCC 170858
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || | | | | || || ||||| || || || ||| | || || |||
Sbjct 170857 GACACCATTGACAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAG 170798
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || || | ||| || || ||||| ||||||| | || || | |||||||||
Sbjct 170797 CAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTGTCCGACTACAAC 170738
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
|| || |||||||| || ||||| ||||| || | |||| || ||
Sbjct 170737 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGCGGCGG 170691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398874981869686
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |