Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_024771.1 Length=151601 Score E Sequences producing significant alignments: (Bits) Value seq361 89.7 5e-13 >seq361 Length=163187 Score = 89.7 bits (98), Expect = 5e-13 Identities = 117/156 (75%), Gaps = 7/156 (4%) Strand=Plus/Plus Query 52141 CGCCTCCGCGGC--CAGAGTGGTGAAGCAGAGGTTGTGGGCCTGGATGATGCTGGGGTAC 52198 |||| ||||||| ||| |||||| |||| |||||||| ||| ||||||||||| ||| Sbjct 65033 CGCC-CCGCGGCAGCAGCGTGGTGTAGCACAGGTTGTGCGCCATCATGATGCTGGGATAC 65091 Query 52199 AGGCTCGCAAAGTCCAGCACCACCACCGG-GTGGACGTGAAAGCCCGACAGAGGGTCGAG 52257 ||||| |||||||||||| ||||||| || | ||| | || | || || || Sbjct 65092 AGGCTGGCAAAGTCCAGCGTGGCCACCGGAGTCG-CGTAGTACCCAGCTTTTGGCTCCAG 65150 Query 52258 CACCTTGGCGCCCTGGTACCCCACGCTGCGTCCGCC 52293 ||| |||| |||| |||| |||||| ||||| || Sbjct 65151 TACCGTGGCACCCTCGTACGCCACGC--CGTCCTCC 65184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484992932647440