Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq133 95.1 8e-15
>seq133
Length=726431
Score = 95.1 bits (104), Expect = 8e-15
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599
||||| || || ||| ||| || || |||||||| ||||| || ||||| |||| ||
Sbjct 170708 CACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTC 170767
Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659
| || || |||||||| |||| |||||||| || | || | || || |||||
Sbjct 170768 GAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 170827
Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718
|| || |||| ||| |||| ||||||| || ||||| || | ||| || || |
Sbjct 170828 GATCTTGGCCTTCA-CATTGTCAATGGTGTCGGAGGACTCCACTTCGAGCGTAATGGTCT 170886
Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || || | ||| || || |||||||||||
Sbjct 170887 TGCCCGTCAGCGTCTTGACGAAGATCTGCAT 170917
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328702501726080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |