Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq133 109 6e-19
>seq133
Length=726431
Score = 109 bits (120), Expect = 6e-19
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 146994 CACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAG 147053
||| || |||| |||| ||||||| || | |||| || ||||||||||| ||||||||
Sbjct 21991 CACCTGCGCCAGCATGCAGGTGAGGAGGGCGTAGGATGCGATGTTGAAGGGCACCCCCAG 22050
Query 147054 GCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAA 147113
||| | ||| | || | |||||||| ||||||||| ||||| ||||| |||||| | ||
Sbjct 22051 GCCGAGGTCGGCGGAGCGCTGGTACATCTGGCACGACAGCTCGCCGTCTGCCACGAAGAA 22110
Query 147114 CTG 147116
|||
Sbjct 22111 CTG 22113
Score = 82.4 bits (90), Expect = 9e-11
Identities = 126/177 (71%), Gaps = 2/177 (1%)
Strand=Plus/Plus
Query 147283 GCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGC 147342
|| |||||||| | |||||||||||||||||| || ||||||||||| || | |||
Sbjct 23528 GCGCCAAAGTGGCGCCACTGGAAGCCGTACACCGGACCCAGGTCGCCCTCCTCGCGGTGT 23587
Query 147343 GAGAAGCC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCC 147401
| ||| ||| || | || |||||| | ||||||| | ||||||||||| ||| ||
Sbjct 23588 CCCAGGCCGCGCGCG-TCCAGGAACTCGCGCGACCCGTTGCCGTCCCAGATGTGCACGCC 23646
Query 147402 CTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458
| ||| ||| | || || | ||| || |||||||||||||||||
Sbjct 23647 GCGGTCGGCCAGCAGGCGCGCGTTGGTCGCGCCGGAGACAAACCAGAGCAGCTCCTC 23703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583485272193600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |