Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq43 199 6e-45
seq99 179 5e-39
seq133 140 5e-27
seq97 140 5e-27
seq88 136 6e-26
seq30 105 1e-16
seq90 98.7 1e-14
seq180 95.1 2e-13
seq84 93.3 6e-13
>seq43
Length=247289
Score = 199 bits (220), Expect = 6e-45
Identities = 213/277 (77%), Gaps = 6/277 (2%)
Strand=Plus/Minus
Query 259909 GTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGT 259967
|||||| ||| || |||||||||| || || |||||||| || ||||| ||| || |
Sbjct 177834 GTTCAC-TCACGCCTCGCCCACGCTGTTCAACGCCGGCACCCCCCGCCCCCAGCTGTCCT 177776
Query 259968 CGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGC 260027
| ||||| || || |||||||||||| |||||||||||||| |||||||| |||
Sbjct 177775 CCTGCTTCCTAGTGTCCATGAAGGCCGACAGCATCGAGGGCATCTACGACACGCTGAAGG 177716
Query 260028 AGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCG 260087
|||||||| |||||| ||| | || ||||||||||| | | ||||| | || |
Sbjct 177715 AGTGCGCGGCCATCTCTAAGTCCGCGGGCGGCATCGGCCTGAGCATGCACAACATCCGTG 177656
Query 260088 CCGCGGGCGCCTACGTGGCGGGCACCAACGGC--CAGTCCAACGGCCTTGTGCCCATGCT 260145
|| |||| ||||| | |||||||||||| ||| ||||||| | |||||||||||
Sbjct 177655 CCACGGGGTCCTACATCCGCGGCACCAACGGCTCCAG--CAACGGCATCGTGCCCATGCT 177598
Query 260146 TCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
||||| || |||||||| ||||||||||| ||||||
Sbjct 177597 GCGCGTCTTCAACGACACCGCGCGCTACGTGGACCAG 177561
Score = 183 bits (202), Expect = 4e-40
Identities = 345/499 (69%), Gaps = 29/499 (6%)
Strand=Plus/Plus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317
||||||||| || | ||| | |||||| ||||| ||||||||| || ||||| ||
Sbjct 47410 CTCCATCTCGCCGAAGCGCAGGCCGCCGTCGCGCGCGCGGCCCTCCACGGGCTGGCGCGT 47469
Query 1600318 GAGCATCTGGACGGGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCGCAG 1600377
|| |||||||| || || || || ||||| ||||||||| ||| ||| |||
Sbjct 47470 CAGGATCTGGACCGGCCCCCGACCGCGCGCGTGGATCTTGTCGTCCACCATGTGCTTCAG 47529
Query 1600378 GGCCTGGTAGTAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCG-GTGTGCG 1600436
| |||||||||| || ||||| |||| ||| | || |||| ||||||
Sbjct 47530 GCGCTGGTAGTAGGTGGGGTTGAGGAAGATGGGCGCCGCCA-GCGCGCGCCCCGTGTGCC 47588
Query 1600437 GGTGGTAGAGCACCTCCTTGCCGTAGCGCT------CGCATCCGTGGCG-AGCCAACTCG 1600489
|| ||| | |||| |||| ||| |||| |||||| | || |
Sbjct 47589 CGTTGTACATGGTCTCCCAGCCGCGCTGCTGGTAGCCGCAGCCGTGGAGTAG-------G 47641
Query 1600490 GCGGCGACATCGTCGACGGTGACGCCGCCAAAGGGCGTGCCGTCGCCCACATAGCCCTCG 1600549
| || || || || ||||| ||| || ||||| ||| |||||||| | | |||| |
Sbjct 47642 GTGGAGATGTCCTCCACGGTCACGGCGGTGAAGGGTGTGGCGTCGCCCTCCTTGCCCAGG 47701
Query 1600550 CGGCAGGCCACCTTGCCCAGGAGGGCCTCCATCATCTTGCCCATGGTCATGCGCGACGGG 1600609
| |||||||||| || || ||||||| || | || ||||||||||||||||||
Sbjct 47702 CACGCCGCCACCTTGCTCATCAGCGCCTCCACCAAGTGACCGATGGTCATGCGCGACGGG 47761
Query 1600610 ATGGCGTGCGGGTTGATCACAATGTCGGG--CGTGGCACCGCCGCGAGGCGACCAGGGCA 1600667
||||||||||||||||| | | |||||| || || || |||| || || ||||||
Sbjct 47762 ATGGCGTGCGGGTTGATGATCAGGTCGGGCACGATGC-CCTCCGC--GGTGA--AGGGCA 47816
Query 1600668 TGTCCTC---GGTGGAGCGCACGCTGCCCACGGTGCCCTTTTGGCCGTGGCGCGACGACA 1600724
||||||| |||| || | |||| | ||||||||| || ||||| ||||| | |
Sbjct 47817 TGTCCTCCTGGGTGTAG---GTGATGCCGATGGTGCCCTTCTGCCCGTGCCGCGAAGCAA 47873
Query 1600725 GTTTGTCGCCCACCTCGGG 1600743
||||||||| |||| |||
Sbjct 47874 ATTTGTCGCCTACCTGGGG 47892
Score = 132 bits (146), Expect = 7e-25
Identities = 305/455 (67%), Gaps = 31/455 (7%)
Strand=Plus/Minus
Query 262969 CAGATCCTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGC 263028
|||||||||||||||| |||| |||||| |||||||||||||||| |||||||
Sbjct 175352 CAGATCCTGGGCAACAACGAGTGCTTCGAGCCGTACACGAGCAACATCTACGTGCGCCGC 175293
Query 263029 GTGCTCTCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGC 263088
||||| || ||||| || || ||||| |||| |||||| | || | | | |||
Sbjct 175292 GTGCTGTCCGGCGAGTTCACGGTGGTGAACCAGCACCTGCT---GCACGACCTCACCCGC 175236
Query 263089 ---GGCCTGT-GGACGCCCGACTTTCGCGACCGGCTCATTGCGGCACAGGGCTCGGTGCA 263144
||||||| ||||| |||| | || ||| | |||| | || ||||||||
Sbjct 175235 CTGGGCCTGTGGGACG-GCGACATGAAGAACGAGCTGGTGGCGGGCAACGGGTCGGTGCA 175177
Query 263145 GGGCTTTGACGACGAGGAGGTGCCGCCCGATCTCAAGGCTCTCTTCAAGACCGTGTGGGA 263204
|||| | ||| | || || |||||||| || | |||||| ||||||||
Sbjct 175176 GGGCCT---------GGACATCCCCGACGCGCTCAAGGCGCTGTACAAGACGGTGTGGGA 175126
Query 263205 GGT------GCCCAACCGGGTGACCATTGATATGGCGGCCGACCGCGCGCCCTATGTCGA 263258
| | || || | |||| || ||||| || || |||| | || ||||
Sbjct 175125 GATCAAGCAGCGCACGCTGGTG------GACATGGCCGCGGATCGCGGCGCGTACATCGA 175072
Query 263259 CCAGAGCCAGTCGCTCAACCTGTACCTCGCCGA-CCCGACGGCCGAGAGCATCACGTCGA 263317
||| |||||| ||||| || || | | || ||| || | ||| |||| ||
Sbjct 175071 TCAGTCCCAGTCCTTCAACGTGCACATGTCGGACCCCAACTTTGGCAAGC-TCACCTCCC 175013
Query 263318 TGCACGCCTATGCGTGGCGTCGCGGCCTCAAGACTGGCATGTACTATCTGCGCACCCGGC 263377
| ||| ||| || ||| || || ||||| || |||||||| |||||||||||
Sbjct 175012 TCCACTTCTACGCCTGGAAGAAGGGGCTGAAGACGGGGATGTACTACCTGCGCACCCGCG 174953
Query 263378 CCGCTGCCAACGCCATTCAATTCACCGTCGATCAG 263412
|||| ||| ||||||| | |||||||| || |||
Sbjct 174952 CCGCGGCCGACGCCATCAAGTTCACCGTGGACCAG 174918
Score = 93.3 bits (102), Expect = 6e-13
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 1601359 CTGCTTGCCCATGGCCGTCTGGTAGATGTTGCGCGGCGCCTGGTTGTGGTTGGAAAACGG 1601418
||||||||||||||||| ||||||| |||||||||||| ||| ||||||| | || ||
Sbjct 49678 CTGCTTGCCCATGGCCGACTGGTAGGTGTTGCGCGGCGACTGATTGTGGTCCGGGAAGGG 49737
Query 1601419 GATGATGGACGCGCAGGCGCCCAGCATGAGCAGCGGGTGGACCTCGACGTGCGT 1601472
| |||||| ||||| | ||||| || | ||||||| |||| ||||||
Sbjct 49738 CACGATGGAGGCGCACACCCCCAGGATCATGGCGGGGTGGATCTCGCAGTGCGT 49791
>seq99
Length=333813
Score = 179 bits (198), Expect = 5e-39
Identities = 213/286 (74%), Gaps = 6/286 (2%)
Strand=Plus/Plus
Query 1455991 TTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATC 1456050
|| ||||| ||||||||||||||||| ||||||||| || | ||| || ||| |
Sbjct 93068 TTCTACGGCTTCCAGATCGCCATCGAGAACATCCACAGCGAGATGTACAGCCTGCTGCTG 93127
Query 1456051 GACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTG 1456110
|| | ||| ||||||||||| |||||||| || || | ||||| ||| |||||
Sbjct 93128 GATGCGTACATCAAGGACCCGCGGCAGAAGGACATGCTGTTCCACGCCACCGAGACGGTA 93187
Query 1456111 CCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGAC 1456170
|| ||| | ||| ||||||||||||||| ||||||||||| ||| || | |
Sbjct 93188 CCAGTGGTCAAGAAGAAGGCCGACTGGGCGCTGAAGTGGATC----TCGAGCGCAGAG-C 93242
Query 1456171 ACTTTGCCGAGCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTT 1456229
|| |||||||| || |||| ||||||| |||| |||||||| || ||||| ||| |
Sbjct 93243 GATTCGCCGAGCGCCTGGTCGCCTTTGCCTGCGTGGAGGGCATATTCTTCTCCGGCTCCT 93302
Query 1456230 TCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
||||| |||||| ||| | |||||||| || |||||||| || ||
Sbjct 93303 TCTGCTCCATCTACTGGGTGAAGAAGCGGGGGCTCATGCCGGGGCT 93348
Score = 114 bits (126), Expect = 2e-19
Identities = 168/235 (71%), Gaps = 12/235 (5%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||| ||||||||||| |||||| |||| ||| ||| |||| ||
Sbjct 246425 ATCTTCAAGGTCCTCAAGCAGGTCCACCCCGACACCGG-----CATT-TCCTCCAAGGCC 246372
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
|| | ||| |||||||||| || ||| | ||||| |||| ||| ||||||
Sbjct 246371 ATCACCATCCTGAACTCGTTCATCGTGGACCAGTTCGACAAGATCGCTACCCAGGCCGCC 246312
Query 725031 CGCCTGGCGCGCTCCAACAAG---CGCAACACGATCGGCACGCGCGAGATCCAGACCGCC 725087
| || | ||| |||||| | || | || | || ||||||||||||||||||
Sbjct 246311 CAGTTGTCCCGCGTGAACAAGAAGCCCACCTTGACCAGC---CGCGAGATCCAGACCGCC 246255
Query 725088 GTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
||||| ||| | | | ||||| ||||||| ||||||||| |||||||||||||
Sbjct 246254 GTGCGGCTGGTGCTACCTGGCGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 246200
Score = 87.8 bits (96), Expect = 3e-11
Identities = 110/150 (73%), Gaps = 1/150 (1%)
Strand=Plus/Plus
Query 1455819 GCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGACGACGAG 1455878
|| |||||||||||||| ||| ||||| | |||||| | ||||| ||| |||||
Sbjct 92718 GCTGAGGAGGTCGACCTGGGCAGCGACATGCAGGACTGGGAGAAGCTGAACGAGAACGAG 92777
Query 1455879 CGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGA 1455938
|| |||||| ||| | |||||||| ||| |||| || |||||||| ||
Sbjct 92778 AAGCACTTCATCTCCCACATTCTCGCCTTCTTT-GCCGGGGCGGACGGCATCGTCCTGGA 92836
Query 1455939 GAACCTGGCCGGCCGCTTTATGAAAGAGGT 1455968
|||||||| || |||||| ||||| |||||
Sbjct 92837 GAACCTGGGCGTCCGCTTCATGAAGGAGGT 92866
>seq133
Length=726431
Score = 140 bits (154), Expect = 5e-27
Identities = 171/232 (74%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||| |||||| |||| |||| ||| |||| ||
Sbjct 615 ATCTTCAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCC 562
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
|| | ||| |||||||||| || ||| | ||||| |||| |||| |||||
Sbjct 561 ATCACCATCCTGAACTCGTTCATCGTGGACCAGTTCGACAAGATCGCCACCCAGGCCTCC 502
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
| ||| | ||| |||||| |||| | || |||||||||||||||||||||
Sbjct 501 CAGCTGTCCCGCGTGAACAAGAAGCCCACGCTGACCAGCCGCGAGATCCAGACCGCCGTG 442
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| |||||| || |||| ||||||||| |||||||||||||
Sbjct 441 CGCCTGGTGCTGCCCGGCGAGCTTGCCAAGCACGCCGTGTCCGAGGGCACCA 390
>seq97
Length=1144356
Score = 140 bits (154), Expect = 5e-27
Identities = 171/232 (74%), Gaps = 6/232 (3%)
Strand=Plus/Plus
Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970
|||| |||||||||||||||||| |||||| |||| |||| ||| |||| ||
Sbjct 306303 ATCTTCAAGGTGCTCAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCC 306356
Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030
|| | ||| |||||||||| || ||| | ||||| |||| |||| |||||
Sbjct 306357 ATCACCATCCTGAACTCGTTCATCGTGGACCAGTTCGACAAGATCGCCACCCAGGCCTCC 306416
Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090
| ||| | ||| |||||| |||| | || |||||||||||||||||||||
Sbjct 306417 CAGCTGTCCCGCGTGAACAAGAAGCCCACGCTGACCAGCCGCGAGATCCAGACCGCCGTG 306476
Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|||||| | ||| |||||| || |||| ||||||||| |||||||||||||
Sbjct 306477 CGCCTGGTGCTGCCCGGCGAGCTTGCCAAGCACGCCGTGTCCGAGGGCACCA 306528
>seq88
Length=544131
Score = 136 bits (150), Expect = 6e-26
Identities = 395/597 (66%), Gaps = 56/597 (9%)
Strand=Plus/Plus
Query 1600258 CTCCATCTCTCCAAGGCGGAAGCCGCCCGAGCGCGAGCGGCCCTCGACCGGCTGCTTGGT 1600317
||||||||| || ||||| | ||||| |||||| ||||||||| |||||| ||||
Sbjct 448939 CTCCATCTCCCCCAGGCGCAGCCCGCCGTCGCGCGATCGGCCCTCGGTGGGCTGCCTGGT 448998
Query 1600318 GAGCATCTGGACG---GGGCCGCGTGGTCGGGCGTGAATCTTGTCGATGGCCACGTGGCG 1600374
||||| |||| || || || | || ||||| |||||||| || ||| |||
Sbjct 448999 GAGCAC---GACGCGCGGCCCTCGCGCGCGCGCGTGCATCTTGTCCATCACCATGTGCTT 449055
Query 1600375 CAGGGCCTGGTAGTAGACCGGCGCCGTAAAGATCAACGCCTCCATGGGCTCGCCGGTG-T 1600433
|| ||||||||| || ||| || | |||| | ||||||| | ||| || ||| |
Sbjct 449056 CAACTTCTGGTAGTACACGGGCCCCATGAAGACGTATGCCTCCAGCGCCTCCCCCGTGAT 449115
Query 1600434 GCGGGTGGTAGAGCACCTCCTTGCCGTAGCGCTCGCATCC-GTGGCGAGCCAACTCGGCG 1600492
|| || | | ||||| |||||||| || | | || | || | ||| ||| |||
Sbjct 449116 GCCGGAG-TGGAGCAGGTCCTTGCCCGAGTAGGAGAACCCCGCCGCCA-CCAGCTCCGCG 449173
Query 1600493 GCGACATCGTCGACGGTGACG--CCGCCAAAGGGCGTGCCGTCGCCCA---------CAT 1600541
| | |||| || ||| |||||| || |||| ||||| | | |
Sbjct 449174 GACAGCGCGTCCAC----ACGGTCCGCCAGCCCGC-TGCCCTCGCCAAAGGCGGTGCCGT 449228
Query 1600542 AGCCCTCGCGGCAGGCCACC---------TTG---CCCAGGAGGGCCTCCATCATCTTGC 1600589
|| | ||||| || |||| ||| ||||| || ||| ||||||||||
Sbjct 449229 AGTGCAGGCGGCCGGACACCGCCCCCGCCTTGGACCCCAGCAG---CTCGATCATCTTGC 449285
Query 1600590 CCATGGTCATGCGCGACGGGATGGCGTGCGGGTTGATCACAATGTCGGGCGTGGCACCGC 1600649
||| |||||||| || |||| | |||||||||| || | | ||||||| | ||||
Sbjct 449286 CCACAGTCATGCGGGAGGGGAAGCCGTGCGGGTTCATGATCAGGTCGGGCACCACCCCGC 449345
Query 1600650 CGCGAGGCGACCAGGGCATGTC---CTCGGTGGAGCGCACGCTGCCC---ACGGTGCCCT 1600703
|| || || |||| | ||| ||||| ||||| ||| | || |||||
Sbjct 449346 -GCTCGGAGA--AGGGGAGGTCGGCCTCGG------GCACGATGCACCCAACCACGCCCT 449396
Query 1600704 TTTGGCCGTGGCGCGACGACAGTTTGTCGCCCACCTCGGGCTGGCGCATGGCCCGCGTGA 1600763
| ||||||||||| || || | |||||||||| |||||| | || || |||| |
Sbjct 449397 TCTGGCCGTGGCGAGAGGAGAACTTGTCGCCCAGCTCGGGGCGCCGTGTGTGCCGCACCA 449456
Query 1600764 CGATCTTGACCGCGTTGGCGCCGTCGCCGTTGCGCGTCACGACGACGCGATGCACCG 1600820
| ||||||| || ||| |||| |||||| ||||| | ||||| | |||||
Sbjct 449457 GCACCTTGACCACGCAGGCCGAGTCGTCGTTGCTGGTCACCATCACGCGGTCCACCG 449513
>seq30
Length=415379
Score = 105 bits (116), Expect = 1e-16
Identities = 146/202 (72%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 332854 GGCGTCAGTGAGGCGCACAAAGCGCAGGATGGCACAACGGCTCTGCAGGGCCTCGATGAC 332913
|||||| | |||||| | |||||| | || || || ||||| | || ||||||||
Sbjct 184826 GGCGTCGGCCAGGCGCGCGTAGCGCACCACCGCGCACCGACTCTGGATGGGCTCGATGAT 184885
Query 332914 CATTGACGACGTGTTGCAGGCCAGGGCAAACCGCGTCGTATTGGTATGCTTTTCCATGGT 332973
| | || || |||||||| ||||| || || ||||| || | | ||| ||||||||
Sbjct 184886 CTTGGAGGAGGTGTTGCAAGCCAGCGCGAAGCGCGTGGTGGCGCTGTGCACCTCCATGGT 184945
Query 332974 CGACCGGAGGGCCTGTTGGGCCGCCGGC-GTGAGGCAGTCGGCCTCGTCGAGGATGATGA 333032
|| |||||||| || || |||| | || | ||||||||||||| || | | ||
Sbjct 184946 GCGGCGCAGGGCCTGCTGCGC-GCCGCCCGTCATCGAGTCGGCCTCGTCCAGCACCACGA 185004
Query 333033 TCTTGTGGCGCCCGTGCGGCAG 333054
|||||||||| ||| | |||||
Sbjct 185005 TCTTGTGGCGGCCGGGGGGCAG 185026
>seq90
Length=671320
Score = 98.7 bits (108), Expect = 1e-14
Identities = 117/156 (75%), Gaps = 6/156 (4%)
Strand=Plus/Plus
Query 1456121 GGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGA 1456180
|||||||||| || ||||| | | ||||||| || | ||| | | ||| || |
Sbjct 288296 GGAAAAAGGCGGAGTGGGCCCTCAGGTGGATCGGCA--GCGGGTCCAG---CTTCGCGCA 288350
Query 1456181 GCGGCTCGTCGGCTTTGCC-GCGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCAT 1456239
|||||| || | ||||||| |||| ||||||||| | ||||| ||| || || |||||
Sbjct 288351 GCGGCTGGTGGCCTTTGCCTGCGTGGAGGGCATCCTCTTCTCCGGCTCCTTTTGTGCCAT 288410
Query 1456240 CTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|| |||||||||||||| |||||||||||| ||
Sbjct 288411 CTACTGGCTCAAGAAGCGGCACCTCATGCCCGGCCT 288446
Score = 95.1 bits (104), Expect = 2e-13
Identities = 123/169 (73%), Gaps = 1/169 (1%)
Strand=Plus/Plus
Query 1455796 AGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACT 1455855
||||| | ||| || ||||| | |||||||| ||||| |||||||| | | |
Sbjct 287333 AGGCCCAAGCCAGCTACTGGACTGTGGAGGAGGTGGACCTATCCGCCGACATGCGGGATT 287392
Query 1455856 GGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCC 1455915
||||| |||| ||||||||||||||| |||||| || | |||||||| ||| ||
Sbjct 287393 GGGTGCGACTGACCGACGACGAGCGCCACTTCATCTCCTACATTCTCGCCTTCTTT-GCG 287451
Query 1455916 GCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAG 1455964
||| ||| || |||||| ||||||||| | | ||||| ||| |||
Sbjct 287452 GCCTCCGACGGTATCGTGCTCGAGAACCTATCTGCACGCTTCATGCAAG 287500
Score = 86.0 bits (94), Expect = 9e-11
Identities = 117/162 (72%), Gaps = 1/162 (1%)
Strand=Plus/Minus
Query 2029581 GCCCGAGAGCATGGCCTTGCGCATCGACGCAATGCCCTCGCCCTGGAGGCGCTTGCGCTC 2029640
|||||||| ||||||| |||| || || |||| |||| ||| |||| |||
Sbjct 37627 GCCCGAGATGATGGCCTGGCGCTGGCGTGCGATACCCTGGCCCGCCAGGTACTTGGCCTC 37568
Query 2029641 GGCTTCCGCCTCGGCCTCCTTGACGATGCGCAACTTGTCGGCCTCGGCCCGGTCCAGCGC 2029700
||| |||||||| ||| ||||||| ||||| | |||||| ||||| | | | || ||
Sbjct 37567 GGCGTCCGCCTCCGCCGCCTTGACAATGCGGATCTTGTCCGCCTCCGACTGCTCGTAGGC 37508
Query 2029701 GGCCATCCTTTGGCGCGCTGCG-CGTTGATGTCGTTCATGGC 2029741
||| | | | ||| ||| |||||||||||||||||||
Sbjct 37507 GGCGAGGCGCAGCCGCTGCGCGGCGTTGATGTCGTTCATGGC 37466
>seq180
Length=261689
Score = 95.1 bits (104), Expect = 2e-13
Identities = 64/72 (89%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 725071 GCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCT 725130
||||||||||||||||||||||||||||| ||| ||| || ||||||| ||| ||||| |
Sbjct 153107 GCGAGATCCAGACCGCCGTGCGCCTGATCCTGCCCGGTGAGCTGGCCAAGCATGCCGTGT 153166
Query 725131 CCGAGGGCACCA 725142
| ||||||||||
Sbjct 153167 CTGAGGGCACCA 153178
>seq84
Length=279745
Score = 93.3 bits (102), Expect = 6e-13
Identities = 160/231 (69%), Gaps = 1/231 (0%)
Strand=Plus/Plus
Query 1817421 CATGAGCACGCCGCGGTCCATAAATGTGTCGTTGGTCGTGAGGAAGCCACAACCGACGAG 1817480
|||||||| | |||| |||| || |||||| | |||| | || | || | ||
Sbjct 194073 CATGAGCAGGTCGCGCTCCAGGAAGGTGTCGCGCTTGGTGAACAGGCGCGAGCCCAGCAG 194132
Query 1817481 GGCGTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGGGC 1817540
| |||| ||| | ||| |||| ||| ||||||||| || |||||| | || || |
Sbjct 194133 CGAGTCCTGGACGATGCCCATGACGGGGCGGTTGGCCTGGGGGGACACGATGTTCAGCGG 194192
Query 1817541 CACGTTCATGGTGTGCGTCACCTCGGCGCGCGCGTCTCAGA-CTGGGGCACATGGAGGTT 1817599
||| |||| | | | | | |||||| || | || | ||| || || | |||
Sbjct 194193 CACCGCCATGATCTCCTTGATCTCGGCCCGGACCTCATGGCTCTGAACCATGTGCATGTT 194252
Query 1817600 CATCTCGTCGCCGTCAAAGTCGGCATTGTAGGTGCCCGTGACGGCCAGGTT 1817650
|||||||||||||||||||||||| ||||||| || || ||| ||||||
Sbjct 194253 CATCTCGTCGCCGTCAAAGTCGGCGTTGTAGGGGCTGGTCACGCTCAGGTT 194303
Score = 91.5 bits (100), Expect = 2e-12
Identities = 129/179 (72%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 1816107 CGCGCTTGATCTGCAGGCTCTCCATCGACTTGATGCACCGGCGCTGGATGTAGCCACGT- 1816165
||| | ||| | |||| |||||| | ||| | ||||||||||||||||| |||
Sbjct 192689 CGCACCTGACCATCAGGTCCTCCATGGCCTTCACCAGGCGGCGCTGGATGTAGCC-CGTG 192747
Query 1816166 CCGGCGGTCTTGACGGCCGTGTCGACCAGGCCCTCGCGGCCGCCGATCATGTGCAAAAAC 1816225
| ||||||||| || |||||||||| || ||||| || ||||| || ||| || ||
Sbjct 192748 CTGGCGGTCTTCACCGCCGTGTCGATCAATCCCTCACGCCCGCCCATGGCGTGGAAGAAG 192807
Query 1816226 ATCTCGCGCGAGTTGAGGCCGCGCTCGTACGAGTTGCGCACAAAGCCGCGGCTCTCGGG 1816284
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Sbjct 192808 AACTCCTGCGGCGTCAGGCCGCGCAGGTAGGAGTTCTCCACGAATCCGCGCGACTCGGG 192866
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177775127012588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |