Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_026511.1
Length=140913
Score E
Sequences producing significant alignments: (Bits) Value
seq133 125 6e-24
seq149 87.8 2e-12
>seq133
Length=726431
Score = 125 bits (138), Expect = 6e-24
Identities = 143/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604
|||||| || |||||||| |||| || ||| || |||| || |||||||| || |||||
Sbjct 170726 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAA 170785
Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664
|||| ||||||||||| | ||| | || |||||||||| |||||| ||||| | |
Sbjct 170786 GATCAGGCGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 170845
Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724
| | |||||| || ||||| || | ||| || || || ||||||| || || ||
Sbjct 170846 GTCAATGGTGTCGGAGGACTCCACTTCGAGCGTAATGGTCTTGCCCGTCAGCGTCTTGAC 170905
Query 35725 AAATATCTGCAT 35736
|| ||||||||
Sbjct 170906 GAAGATCTGCAT 170917
>seq149
Length=203194
Score = 87.8 bits (96), Expect = 2e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567
|||||||||| | | || |||| || | || |||||| || |||||||| ||||
Sbjct 6847 TTCCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 6906
Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627
|| ||| || | || ||||||||||| |||||||| |||| ||||| ||||||| |
Sbjct 6907 ACAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGGG 6966
Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCA 35660
| | | |||||| ||| ||||| |||||
Sbjct 6967 GGATTCCCTCCTTATCCTGAATCTTGGCCTTCA 6999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 450791492539920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |