Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq99 134 2e-26 >seq99 Length=333813 Score = 134 bits (148), Expect = 2e-26 Identities = 125/159 (79%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717 |||||| || ||| || |||||||| ||||| || || || || |||||| || || Sbjct 93403 GGCAAAGTCGGTGTGCAGGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAAGGTCAGCCC 93344 Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777 |||||||| ||||||||||||| ||| || || | |||||| || ||||||||||| || Sbjct 93343 CGGCATGAGCCCCCGCTTCTTCACCCAGTAGATGGAGCAGAAGGAGCCGGAGAAGAATAT 93284 Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA 122816 |||||||| || ||||| || | ||||| |||||||| Sbjct 93283 GCCCTCCACGCAGGCAAAGGCGACCAGGCGCTCGGCGAA 93245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628029063950400