Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq149 84.2 7e-11 >seq149 Length=203194 Score = 84.2 bits (92), Expect = 7e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 || |||||||| | | || || || || || || ||||| || || || || || || Sbjct 6846 ATTCCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 6905 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || ||||| || || || || || |||||||| || || || || || || Sbjct 6906 GACAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGG 6965 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATC 140668 || ||||| || ||||||||||| || || || || || || Sbjct 6966 GGGATTCCCTCCTTATCCTGAATCTTGGCCTTCACGTTGTC 7006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515247139090322