Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq133 98.7 9e-16
>seq133
Length=726431
Score = 98.7 bits (108), Expect = 9e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 6903 CCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAG 6962
|||| |||||||| | ||||||||| ||||| ||||| |||| |||||||||||| ||
Sbjct 23526 CCGCGCCAAAGTGGCGCCACTGGAAGCCGTACACCGGACCCAGGTCGCCCTCCTCGCGGT 23585
Query 6963 ATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCC 7022
| | || ||| |||||| || || || ||||||| |||||||||| | ||| |
Sbjct 23586 GTCCCAGGCCGCGCGCGTCCAGGAACTCGCGCGACCCGTTGCCGTCCCAGATGTGCACGC 23645
Query 7023 CCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGA 7082
| ||| | ||| | ||| || || || || ||||| |||||||||||
Sbjct 23646 CGCGGTCGGCCAGCAGGCGCGCGTTGGTCGCGCCGGAGACAAACCAGAGCAGCTCCTCAG 23705
Query 7083 CCACGCC 7089
|||||||
Sbjct 23706 CCACGCC 23712
Score = 98.7 bits (108), Expect = 9e-16
Identities = 134/187 (72%), Gaps = 0/187 (0%)
Strand=Plus/Minus
Query 34256 GGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGGGGGCCACGAACACCAAGGAGCTCTCG 34315
||||||| ||||||||||| ||||| || || || || ||| | ||| |
Sbjct 23712 GGCGTGGCTGAGGAGCTGCTCTGGTTTGTCTCCGGCGCGACCAACGCGCGCCTGCTGGCC 23653
Query 34316 TCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGG 34375
||| || ||| | |||||||||| ||||||| || || || |||||| ||| ||
Sbjct 23652 GACCGCGGCGTGCACATCTGGGACGGCAACGGGTCGCGCGAGTTCCTGGACGCGCGCGGC 23593
Query 34376 TTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTT 34435
| | || |||||||||||| |||| ||||| ||||| ||||||||| | ||||||
Sbjct 23592 CTGGGACACCGCGAGGAGGGCGACCTGGGTCCGGTGTACGGCTTCCAGTGGCGCCACTTT 23533
Query 34436 GGGGCGG 34442
|| ||||
Sbjct 23532 GGCGCGG 23526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448260304373280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |