Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201 4-08-01] 374 sequences; 22,924,637 total letters Query= NC_029311.1 Length=124049 Score E Sequences producing significant alignments: (Bits) Value seq361 84.2 2e-11 >seq361 Length=163187 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/152 (74%), Gaps = 9/152 (6%) Strand=Plus/Minus Query 54692 CGTCGGGTATCAAGGCGCCACCGTGCTGGACCCAGAGGCGGGGTTCCATATGAGCCCCGT 54751 ||| | ||| | || ||||| || ||||| ||| | || |||| | | || | ||| Sbjct 65175 CGTGGCGTACGAGGGTGCCACGGTACTGGAGCCAAAAGCTGGGTACTACGCGA-CTCCG- 65118 Query 54752 CGTGGTCT---TTGATTTTGCCAGCCTGTACCCCAGCATCATCCAGGCGCACAACCTGTG 54808 |||| | | || |||||||||||||| ||||||||||| ||||||||||||||| Sbjct 65117 -GTGGCCACGCTGGACTTTGCCAGCCTGTATCCCAGCATCATGATGGCGCACAACCTGTG 65059 Query 54809 CTTCAGCACGCTCGCGCTGGACCGGGGCGCGC 54840 || || |||||| |||| |||||||||| Sbjct 65058 CTACACCACGCT---GCTGCCGCGGGGCGCGC 65030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396830191190140