Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_029311.1
Length=124049
Score E
Sequences producing significant alignments: (Bits) Value
seq361 84.2 2e-11
>seq361
Length=163187
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/152 (74%), Gaps = 9/152 (6%)
Strand=Plus/Minus
Query 54692 CGTCGGGTATCAAGGCGCCACCGTGCTGGACCCAGAGGCGGGGTTCCATATGAGCCCCGT 54751
||| | ||| | || ||||| || ||||| ||| | || |||| | | || | |||
Sbjct 65175 CGTGGCGTACGAGGGTGCCACGGTACTGGAGCCAAAAGCTGGGTACTACGCGA-CTCCG- 65118
Query 54752 CGTGGTCT---TTGATTTTGCCAGCCTGTACCCCAGCATCATCCAGGCGCACAACCTGTG 54808
|||| | | || |||||||||||||| ||||||||||| |||||||||||||||
Sbjct 65117 -GTGGCCACGCTGGACTTTGCCAGCCTGTATCCCAGCATCATGATGGCGCACAACCTGTG 65059
Query 54809 CTTCAGCACGCTCGCGCTGGACCGGGGCGCGC 54840
|| || |||||| |||| ||||||||||
Sbjct 65058 CTACACCACGCT---GCTGCCGCGGGGCGCGC 65030
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396830191190140
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |