Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20protothecoides_20[refseq_20GCF_5F000733215.1_20201
4-08-01] 374 sequences; 22,924,637 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq133 167 2e-36
seq149 89.7 4e-13
>seq133
Length=726431
Score = 167 bits (184), Expect = 2e-36
Identities = 176/232 (76%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | || ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 170687 CATGCCGCCGCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 170746
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| |||| || |||||||| ||||||||||||| |||||||| || |
Sbjct 170747 GGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCGGG 170806
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTC 44286
||| | || ||||| ||| ||||| ||||| | | |||||||||| ||| ||
Sbjct 170807 AGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTGTCAATGGTGTCGGAGGACTC 170866
Query 44287 CACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||| || | |||||| ||||| ||||| || ||||| |||||||| ||||||
Sbjct 170867 CACTTCGAGCGTAATGGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATG 170918
Score = 95.1 bits (104), Expect = 9e-15
Identities = 114/155 (74%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | || ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 170915 CATGCCGCCGCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTC 170974
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| |||| || |||||||| ||||||||||||| ||||| || || |
Sbjct 170975 GGACAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGTTGGTCCGG 171034
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCA 44261
|| | || ||||| ||| ||||| |||||
Sbjct 171035 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCA 171069
>seq149
Length=203194
Score = 89.7 bits (98), Expect = 4e-13
Identities = 112/154 (73%), Gaps = 0/154 (0%)
Strand=Plus/Plus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
||||| || | ||| | || |||||||| || ||| |||||| ||||||||||| |||
Sbjct 6846 ATTCCACCACGCAGGCGCAGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCG 6905
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
| || ||| | || ||||||||||| || |||||||||| ||||| || || |
Sbjct 6906 GACAGGGTGCGGCCATCCTCCAGCTGCTTGCCCGCAAAGATCAGGCGCTGTTGGTCCGGG 6965
Query 44228 GGCACACCTTCCTTTTCCGTTATCTTCTGCTTCA 44261
|| | || ||||| ||| ||||| |||||
Sbjct 6966 GGGATTCCCTCCTTATCCTGAATCTTGGCCTTCA 6999
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359988759118758
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |