Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1211 116 4e-21 >seq1211 Length=2175998 Score = 116 bits (128), Expect = 4e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 145762 TGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCC 145821 || || |||||| |||| ||||| ||||| ||| |||||||||||||| ||||| ||| Sbjct 1750884 TGCGCCACCATGCAGGTGAGCAGCGAGTACGAGGCGATGTTGAAGGGCACGCCCAGGCCC 1750943 Query 145822 ATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTG 145880 | ||| | ||| |||||||||| ||||||| ||||| ||| | |||||||||||||| Sbjct 1750944 AGGTCGCACGACCGCTGGTACATCTGGCAGCTCAGCTCGCCGTCGGCCACGTAGAACTG 1751002 Score = 82.4 bits (90), Expect = 9e-11 Identities = 69/85 (81%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 145670 TCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGT 145729 |||||||| | | || |||||||||||||| ||| ||||| ||||| ||||| |||| Sbjct 1750617 TCAGCTGGTCCCTAAGCGGCTCCACGTGGTTTGCGTACACGTGGGCGTCACCCAGCACGT 1750676 Query 145730 GGATGAAGTCCCCGGGCTCGAGGCC 145754 | | ||||||||||||| |||||| Sbjct 1750677 GCACAAAGTCCCCGGGCTTGAGGCC 1750701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590066871957840