Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq1279 93.3 4e-14 >seq1279 Length=865741 Score = 93.3 bits (102), Expect = 4e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 5380 GTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCAGCGCCCAC 5439 ||| ||||||||||| || || | ||| |||||||| ||||| | ||||| |||||| Sbjct 224110 GTTGAACAGCACCACGCCCACCTCGCCGCGGTAGTCCTCGTCCACCACGCCGGCGCCCGT 224169 Query 5440 GTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCTATGCGTCCGTA 5490 |||||||||||| ||||| || ||||| || || || || | ||| |||| Sbjct 224170 GTCGATAAAGTGCTTGACGGCCAGGCCCGACCGCGGCGCCACGCGCGCGTA 224220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447742866599520