Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1279 129 5e-25 >seq1279 Length=865741 Score = 129 bits (142), Expect = 5e-25 Identities = 115/144 (80%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 5611 GCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCC 5670 ||||| || ||| ||| | ||| |||| ||||||||||||||||||||| | ||| Sbjct 224077 GCCCGCCTCACCCTGGAAGGCCGTGTCGCCGTGGTTGAACAGCACCACGCCCACCTCGCC 224136 Query 5671 GCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCC 5730 ||||||||| |||| | |||||| |||||| |||||| ||||||||||| |||||||| Sbjct 224137 GCGGTAGTCCTCGTCCACCACGCCGGCGCCCGTGTCGATAAAGTGCTTGACGGCCAGGCC 224196 Query 5731 GGAGCGGGGAGCCACGCGGCCGTA 5754 || || || |||||||| |||| Sbjct 224197 CGACCGCGGCGCCACGCGCGCGTA 224220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430047345226352