Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1168 125 9e-24 seq1094 102 1e-16 >seq1168 Length=1683484 Score = 125 bits (138), Expect = 9e-24 Identities = 123/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| || |||||||| || |||||||| || || |||||| || || Sbjct 215946 GCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 215887 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||| | |||||| || | || || || |||||||||||||| Sbjct 215886 GGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGGAGCAGAAAGAGCCCGAGAAGAAGATG 215827 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAG 126205 |||||||| || || || || | || |||||||||||| Sbjct 215826 CCCTCCACGCAGGCAAAGGCGACCAGCCGCTCAGCAAAG 215788 >seq1094 Length=468076 Score = 102 bits (112), Expect = 1e-16 Identities = 120/161 (75%), Gaps = 5/161 (3%) Strand=Plus/Plus Query 126096 AGCACAGTCCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCG 126155 ||||| || |||||||| |||||||| | |||||| || || || || || || | Sbjct 337289 AGCACCCACCGGGCATGAGCTGGCGCTTCTTGAGCCAGAAGATGGCGCAGAAGGAGCCGG 337348 Query 126156 AGAAGAAGATTCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGC-GCGAC 126214 ||||| ||| |||||||| |||||| |||| | || ||||| |||||| ||| || | Sbjct 337349 AGAAGTGGATGCCCTCCACGCACGCGTACGCCACCAGCCGCTCCGCAAAGCAGCTGCTGC 337408 Query 126215 TTTGTGTCAAACCACTTCATCGCCCACTGCGCCTTTTTCTC 126255 | | ||| ||||||||||||||| |||||| ||||| Sbjct 337409 TCT----CAATCCACTTCATCGCCCAGGCCGCCTTCTTCTC 337445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597343549525680