Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1168 107 2e-18 >seq1168 Length=1683484 Score = 107 bits (118), Expect = 2e-18 Identities = 127/171 (74%), Gaps = 1/171 (1%) Strand=Plus/Minus Query 93965 CCGACTCCATCTCC-GGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATAC 94023 ||| ||| ||| | || || | ||||| ||||||||| || || |||||| || | Sbjct 613441 CCGCCTCACTCTGCAGGCATCTACGACACCCTCAAGGAGTGCGCCTGCATCTCCAAGTCA 613382 Query 94024 GCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGT 94083 || || || ||||| || | ||| || | || |||| || ||||||||||| || Sbjct 613381 GCCGGCGGCATCGGCCTCTCCATGCACAACATCCGCGCCACCGGCTCCTACATCCGTGGC 613322 Query 94084 ACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||||| ||||||||||||||| | ||||| ||||| || ||||||||| || Sbjct 613321 ACCAACGGCACCTCCAACGGCATTGTCCCCATGCTGCGCGTCTTCAACGAC 613271 Score = 105 bits (116), Expect = 7e-18 Identities = 79/93 (85%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| ||||||| |||||||||||||| || |||||||| | |||||||| ||||||||| Sbjct 610386 AACTCGCTGCTGGTGGCCCCCATGCCGACCGCCTCCACCTCCCAGATCCTGGGCAACAAC 610327 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTAC 95181 |||| ||||| |||| |||||||||| | ||| Sbjct 610326 GAGTGCTTCGAGCCCTACACCTCCAACATCTAC 610294 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494714876282160