Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1168 129 9e-25 >seq1168 Length=1683484 Score = 129 bits (142), Expect = 9e-25 Identities = 132/170 (78%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 159915 ACAGGAGGCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACA 159974 |||| ||||||||||||||| |||||| |||||||| || ||||||| ||||||||| | Sbjct 215957 ACAGCAGGCACGCAAAGTCGGTGTGCAGGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGA 215898 Query 159975 TGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCA-AAAGCACCG 160033 | ||||||| ||||||| || ||| |||||||| || |||| ||| |||| || Sbjct 215897 AGGTGAGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAGAAGATGG-AGCAGAAAGAGCCC 215839 Query 160034 CTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAA 160083 || ||||| ||||||||| ||||| || || |||| |||| |||| Sbjct 215838 GAGAAGAAGATGCCCTCCACGCAGGCAAAGGCGACCAGCCGCTCAGCAAA 215789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795141821513760