Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1168 149 8e-31 seq1094 93.3 5e-14 >seq1168 Length=1683484 Score = 149 bits (164), Expect = 8e-31 Identities = 129/160 (81%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 102173 CTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTT 102232 |||||||||||| || |||| ||||| || || ||||| ||||||||||| || || || Sbjct 215788 CTTTGCTGAGCGGCTGGTCGCCTTTGCCTGCGTGGAGGGCATCTTCTTCTCGGGCTCTTT 215847 Query 102233 CTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGA 102292 |||| | || | |||||||||||||| || |||||||| || ||| |||||||||||| Sbjct 215848 CTGCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGA 215907 Query 102293 GCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGCG 102332 ||| ||||| || |||||||| || ||| || |||||| Sbjct 215908 GCTCATCTCGCGCGACGAGGGCCTGCACACCGACTTTGCG 215947 >seq1094 Length=468076 Score = 93.3 bits (102), Expect = 5e-14 Identities = 112/150 (75%), Gaps = 3/150 (2%) Strand=Plus/Minus Query 102126 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 102185 ||||| |||| ||||| ||||||||| |||| | | | || | |||||| ||||| Sbjct 337442 AAGAAGGCGGCCTGGGCGATGAAGTGGATTGAGAGCA-GCAGC--TGCTTTGCGGAGCGG 337386 Query 102186 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTAT 102245 || | || | ||||| || ||||| ||| |||||| || ||||||||||| || | Sbjct 337385 CTGGTGGCGTACGCGTGCGTGGAGGGCATCCACTTCTCCGGCTCCTTCTGCGCCATCTTC 337326 Query 102246 TGGCTCAAGAAGCGAGGTCTCATGCCAGGT 102275 |||||||||||||| |||||||| ||| Sbjct 337325 TGGCTCAAGAAGCGCCAGCTCATGCCCGGT 337296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620731956009120