Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1130 89.7 2e-12 >seq1130 Length=2431 Score = 89.7 bits (98), Expect = 2e-12 Identities = 123/170 (72%), Gaps = 4/170 (2%) Strand=Plus/Plus Query 302709 CTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCT 302768 ||| || ||||| |||| ||| || | |||| |||||| ||||| ||||| || | Sbjct 129 CTCGACAAAACCGCGCGACTCTGGTCCGTAGTCGTCCTTGGTGAAGTGCGGCAGCGTGCG 188 Query 302769 GTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAAT 302828 | | |||| | ||||| ||||| || || ||||||||||| |||| ||| | ||| Sbjct 189 CTGGTTGAAGCCAAAGGGGATGCGCTTGCCCTCCACGTTCTGCTGGCCCACGCAGGCAAT 248 Query 302829 CATCTGCGAAATATT--TAAATCACTGCCCTTGGAGCCAGCATTTACCAT 302876 |||||| || || || | || | |||||||||||| ||| | ||||| Sbjct 249 CATCTGGGAGATGTTGATGAAGGA--GCCCTTGGAGCCGGCAGTCACCAT 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471792217585602