Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= NC_021530.1
Length=171407
Score E
Sequences producing significant alignments: (Bits) Value
seq1307 363 2e-95
>seq1307
Length=2189
Score = 363 bits (402), Expect = 2e-95
Identities = 502/699 (72%), Gaps = 10/699 (1%)
Strand=Plus/Minus
Query 159618 ATTGGTTTCATGCTCCGTCAGTTTGAACTGGCACGTCTCATTGGTA----TCCGTCCTTA 159673
|||||||| ||||| |||||||||||| | || ||| | |||| | ||||| ||
Sbjct 2189 ATTGGTTTTATGCTTCGTCAGTTTGAAATTGCGCGT----TCGGTAAAAATTCGTCCATA 2134
Query 159674 CAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTCTTCCTCATCTACCC 159733
|| || ||||| ||||| | ||| ||| |||| || || || ||| | || || ||
Sbjct 2133 TAACGCGATTGCATTCTCAGCTCCAATTTCTGTATTCGTTTCTGTATTCTTAATTTATCC 2074
Query 159734 ATTGGGTCAGTCCAGTTGGTTTTTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATT 159793
|| ||||| || ||||||| || || || || || || || ||||| || ||||
Sbjct 2073 TTTAGGTCAATCTGGTTGGTTCTTTGCACCAAGTTTCGGCGTTGCTGCAATTTTCCGATT 2014
Query 159794 CCTGTTGTTCCTTCAAGGATTTCACAACTGGACGTTAAATCCCTTCCATATGATGGGAGT 159853
| | || ||| | |||||||| || |||||||| ||||| || |||||||||||||| ||
Sbjct 2013 CATTTTATTCTTCCAAGGATTCCATAACTGGACTTTAAACCCTTTCCATATGATGGGTGT 1954
Query 159854 TGCTGGTATACTAGGTGGAGCACTACTCAGTGCCATCCATGGCGTTACTGTAGAGAACAC 159913
||| ||| |||| || | |||| |||| |||| || || || | ||||| || |||||
Sbjct 1953 TGCCGGTGTACTTGGAGCAGCATTACTTTGTGCAATTCACGGTGCAACTGTTGAAAACAC 1894
Query 159914 ACTGTATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCAACTCAAGAGGA 159973
|| | ||||||||| || ||||| || || |||||| | |||| |||| ||
Sbjct 1893 GCTTTTTGAAGATGGTGATGGTGCAAACACATTCCGTGCGTTTAACCCAACACAAGCTGA 1834
Query 159974 GGAGACTTACTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTT 160033
|| ||||| || ||||| || |||||||| |||||||| || || || ||| | || ||
Sbjct 1833 AGAAACTTATTCAATGGTTACAGCAAACCGTTTCTGGTCACAAATTTTTGGTGTAGCTTT 1774
Query 160034 TTCTAACAAGCGGTGGCTTCATTTCTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGAC 160093
||| ||||| || ||| | || ||||| ||| | ||||| || || | ||||||||||
Sbjct 1773 TTCAAACAAACGTTGGTTACACTTCTTTATGCTATTTGTTCCAGTAACTGGTCTTTGGAT 1714
Query 160094 ATCCTCTATTGGCATTATTGGCCTTGCTCTTAATCTT-CGTGCTTACGATTTCGTAAGTC 160152
| ||||| | | || | ||| |||| ||| ||||| || |||||||| |
Sbjct 1713 GAGTGCAATTGGTGTAGTAGGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCAC 1655
Query 160153 AAGAGATCAGAGCAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTAT 160212
|||| || | || || ||||| || || ||||| || ||||| || ||||| || || |
Sbjct 1654 AAGAAATTCGCGCTGCGGAAGACCCTGAGTTTGAAACTTTCTATACAAAAAATATTCTTT 1595
Query 160213 TGAACGAAGGACTACGTGCATGGTTGGCACCTGCTGATCAACCCCATGAAAACTTTATCT 160272
| |||||||| | ||||| ||| |||| || ||||| || |||||||| | | |
Sbjct 1594 TAAACGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTAGTAT 1535
Query 160273 TCCCAGAAGAAGTATTGCCTAGAGGCAACGCCCTTTAAT 160311
|||| || || || || || | || ||||| |||||||
Sbjct 1534 TCCCTGAGGAGGTTTTACCACGTGGAAACGCTCTTTAAT 1496
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548365173600720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |