Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq1307 432 4e-116 >seq1307 Length=2189 Score = 432 bits (478), Expect = 4e-116 Identities = 509/689 (74%), Gaps = 0/689 (0%) Strand=Plus/Minus Query 159703 ATAGGTTTTATGCTACGGCAATTTGAAATTGCTCGTCTAGTTGGTATCCGTCCTTACAAT 159762 || ||||||||||| || || ||||||||||| ||| || || ||||| || || Sbjct 2189 ATTGGTTTTATGCTTCGTCAGTTTGAAATTGCGCGTTCGGTAAAAATTCGTCCATATAAC 2130 Query 159763 GCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTGTCAGCGTATTCCTTATCTATCCACTG 159822 || ||||| ||||| | ||| ||| |||| || || |||||| | || ||||| | Sbjct 2129 GCGATTGCATTCTCAGCTCCAATTTCTGTATTCGTTTCTGTATTCTTAATTTATCCTTTA 2070 Query 159823 GGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTG 159882 ||||| ||| |||||||||||||| |||||||| || || ||||| || ||||| | Sbjct 2069 GGTCAATCTGGTTGGTTCTTTGCACCAAGTTTCGGCGTTGCTGCAATTTTCCGATTCATT 2010 Query 159883 TTGTTCCTTCAGGGTTTCCACAACTGGACCCTCAACCCCTTCCATATGATGGGAGTTGCT 159942 || ||| | || || ||||| |||||||| | ||||| |||||||||||||| ||||| Sbjct 2009 TTATTCTTCCAAGGATTCCATAACTGGACTTTAAACCCTTTCCATATGATGGGTGTTGCC 1950 Query 159943 GGTATACTAGGTGGAGCACTGTTGTGTGCAATCCATGGTGCTACTGTAGAGAACACATTG 160002 ||| |||| || | |||| | | |||||||| || ||||| ||||| || ||||| | Sbjct 1949 GGTGTACTTGGAGCAGCATTACTTTGTGCAATTCACGGTGCAACTGTTGAAAACACGCTT 1890 Query 160003 TTTGAAGATGGAGAACAAGCAAACACATTTAAGGCGTTTGAGCCTACTCAAGAAGAAGAG 160062 ||||||||||| || ||||||||||| |||||| | || || |||| ||||| Sbjct 1889 TTTGAAGATGGTGATGGTGCAAACACATTCCGTGCGTTTAACCCAACACAAGCTGAAGAA 1830 Query 160063 ACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCT 160122 |||||||| ||||| || |||||||| |||||||| || || || ||||| || ||||| Sbjct 1829 ACTTATTCAATGGTTACAGCAAACCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCA 1770 Query 160123 AACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCC 160182 ||||| || ||| | || || || ||| | ||||| || || | ||||| |||| Sbjct 1769 AACAAACGTTGGTTACACTTCTTTATGCTATTTGTTCCAGTAACTGGTCTTTGGATGAGT 1710 Query 160183 TCTATTGGCATTATTGGTCTTGCTTTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAG 160242 | ||||| | | ||| | ||||| ||| | ||||| || |||||||| || || Sbjct 1709 GCAATTGGTGTAGTAGGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAA 1650 Query 160243 ATTAGAGCAGCAGAAGATCCTGAATTTGAGACCTTCTACACCAAGAACATCCTATTGAAT 160302 ||| | || || ||||| ||||| ||||| || ||||| || || || || || || || Sbjct 1649 ATTCGCGCTGCGGAAGACCCTGAGTTTGAAACTTTCTATACAAAAAATATTCTTTTAAAC 1590 Query 160303 GAAGGACTTCGTGCTTGGATGGCACCTGCTGATCAACCACATGAAAACTTTATCTTCCCT 160362 ||||| |||||||||||||||| || ||||| || |||||||| | | |||||| Sbjct 1589 GAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTAGTATTCCCT 1530 Query 160363 GAGGAAGTACTACCTAGAGGTAACGCACT 160391 ||||| || |||| | || ||||| || Sbjct 1529 GAGGAGGTTTTACCACGTGGAAACGCTCT 1501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573014358871200