Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_026926.1 Length=192108 Score E Sequences producing significant alignments: (Bits) Value seq1307 367 2e-96 >seq1307 Length=2189 Score = 367 bits (406), Expect = 2e-96 Identities = 497/690 (72%), Gaps = 2/690 (0%) Strand=Plus/Minus Query 182685 ATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGCCTGATTGGAATCAGACCTTACAAT 182744 |||||||| |||||| | || |||||| |||| || | | ||| | || || || Sbjct 2189 ATTGGTTTTATGCTTCGTCAGTTTGAAATTGCGCGTTCGGTAAAAATTCGTCCATATAAC 2130 Query 182745 GCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTGTTCCTCATCTATCCTTTG 182804 |||||||| || || | ||| ||| |||||||||| ||| ||| | || |||||||| Sbjct 2129 GCGATTGCATTCTCAGCTCCAATTTCTGTATTCGTTTCTGTATTCTTAATTTATCCTTTA 2070 Query 182805 GGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCCTG 182864 || || || |||||| || || || || || || || || || ||| | ||| | Sbjct 2069 GGTCAATCTGGTTGGTTCTTTGCACCAAGTTTCGGCGTTGCTGCAATTTTCCGATTCATT 2010 Query 182865 TTGTTCCTTCAGGGTTTCCACAACTGGACACTCAACCCCTTCCATATGATGGGAGTTGCT 182924 || ||| | || || ||||| |||||||| | ||||| |||||||||||||| ||||| Sbjct 2009 TTATTCTTCCAAGGATTCCATAACTGGACTTTAAACCCTTTCCATATGATGGGTGTTGCC 1950 Query 182925 GGTATACTGGGTGGAGCACTGCTCAGTGCTATCCATGGTGTCACAGTAGAGAATACCTTG 182984 ||| |||| || | |||| | || |||| || || |||| || || || || || | Sbjct 1949 GGTGTACTTGGAGCAGCATTACTTTGTGCAATTCACGGTGCAACTGTTGAAAACACGCTT 1890 Query 182985 TATGAAGATGGAGAACAGGCAAACACATTTAAAGCGTTCGATTCCACTCAGGAGGAGGAG 183044 | ||||||||| || ||||||||||| ||||| | | || || | || || Sbjct 1889 TTTGAAGATGGTGATGGTGCAAACACATTCCGTGCGTTTAACCCAACACAAGCTGAAGAA 1830 Query 183045 ACCTATTCGATGGTTACAGCGAATCGTTTTTGGTCACAAATCTTCGGGGTTGCGTTTAGC 183104 || ||||| ||||||||||| || ||||| ||||||||||| || || || || ||| Sbjct 1829 ACTTATTCAATGGTTACAGCAAACCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCA 1770 Query 183105 AATAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCT 183164 || || |||||||| |||||||||||| | |||||||| || | ||||||||| | | Sbjct 1769 AACAAACGTTGGTTACACTTCTTTATGCTATTTGTTCCAGTAACTGGTCTTTGGATGAGT 1710 Query 183165 TCTATTGGGATCATTGGGCTTGCTCTTAATCTT-CGTGCTTATGATTTTGTGAGTCAAGA 183223 | ||||| | | || | ||| |||| ||| ||||| |||||||| || ||||| Sbjct 1709 GCAATTGGTGTAGTAGGTTTAGCT-TTAAACTTACGTGCGTATGATTTCGTTTCACAAGA 1651 Query 183224 GATTAGAGCAGCAGAAGATCCTGAGTTCGAGACGTTCTACACAAAGAACATCCTTCTCAA 183283 ||| | || || ||||| |||||||| || || ||||| ||||| || || ||| | || Sbjct 1650 AATTCGCGCTGCGGAAGACCCTGAGTTTGAAACTTTCTATACAAAAAATATTCTTTTAAA 1591 Query 183284 TGAAGGACTACGTGCTTGGTTGGCACCTGCCGATCAACCACATGAAAACTTCATCTTCCC 183343 ||||| | ||||||||| |||| || ||||| || |||||||| | | ||||| Sbjct 1590 CGAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTAGTATTCCC 1531 Query 183344 TGAAGAAGTTCTACCTAGAGGTAACGCACT 183373 ||| || ||| |||| | || ||||| || Sbjct 1530 TGAGGAGGTTTTACCACGTGGAAACGCTCT 1501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 614607259058880