Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015- 11-03] 1,346 sequences; 56,992,954 total letters Query= NC_026928.1 Length=189418 Score E Sequences producing significant alignments: (Bits) Value seq1307 318 7e-82 >seq1307 Length=2189 Score = 318 bits (352), Expect = 7e-82 Identities = 482/686 (70%), Gaps = 0/686 (0%) Strand=Plus/Minus Query 179547 ATTGGTTTCATGCTTAGGCAATTTGAACTTGCTCGCCTGATTGGTATCAGACCTTACAAT 179606 |||||||| |||||| | || |||||| |||| || | | || | || || || Sbjct 2189 ATTGGTTTTATGCTTCGTCAGTTTGAAATTGCGCGTTCGGTAAAAATTCGTCCATATAAC 2130 Query 179607 GCGATTGCTTTTTCTGGTCCTATTGCTGTATTCGTCAGTGTTTTCCTCATCTATCCTTTG 179666 |||||||| || || | ||| ||| |||||||||| ||| ||| | || |||||||| Sbjct 2129 GCGATTGCATTCTCAGCTCCAATTTCTGTATTCGTTTCTGTATTCTTAATTTATCCTTTA 2070 Query 179667 GGACAGTCCTCTTGGTTTTTCGCGCCGTCCTTTGGTGTCGCGGCGATCTTCAGGTTCTTG 179726 || || || |||||| || || || || || || || || || ||| | ||| | Sbjct 2069 GGTCAATCTGGTTGGTTCTTTGCACCAAGTTTCGGCGTTGCTGCAATTTTCCGATTCATT 2010 Query 179727 CTGTTCCTTCAGGGTTTCCACAACTGGACGCTCAACCCCTTCCATATGATGGGAGTTGCT 179786 | ||| | || || ||||| |||||||| | ||||| |||||||||||||| ||||| Sbjct 2009 TTATTCTTCCAAGGATTCCATAACTGGACTTTAAACCCTTTCCATATGATGGGTGTTGCC 1950 Query 179787 GGTATACTAGGAGGAGCACTGCTCAGTGCTATCCATGGAGTTACTGTAGAGAATACATTG 179846 ||| |||| |||| |||| | || |||| || || || | ||||| || || || | Sbjct 1949 GGTGTACTTGGAGCAGCATTACTTTGTGCAATTCACGGTGCAACTGTTGAAAACACGCTT 1890 Query 179847 TATGAAGATGGAGAACAAGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAG 179906 | ||||||||| || ||||| || || |||||| | | ||||| | ||||| Sbjct 1889 TTTGAAGATGGTGATGGTGCAAACACATTCCGTGCGTTTAACCCAACACAAGCTGAAGAA 1830 Query 179907 ACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCATTTTCT 179966 |||||||| ||||| || |||||||| |||||||| || || || ||| | || ||||| Sbjct 1829 ACTTATTCAATGGTTACAGCAAACCGTTTCTGGTCACAAATTTTTGGTGTAGCTTTTTCA 1770 Query 179967 AACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGACATCC 180026 ||||| || ||| | || || || ||| | ||||| || || | ||||| |||| Sbjct 1769 AACAAACGTTGGTTACACTTCTTTATGCTATTTGTTCCAGTAACTGGTCTTTGGATGAGT 1710 Query 180027 TCTATTGGCATTATTGGTCTTGCTCTCAACCTTCGTGCTTACGATTTCGTAAGTCAGGAG 180086 | ||||| | | ||| | ||| | ||| | ||||| || |||||||| || || Sbjct 1709 GCAATTGGTGTAGTAGGTTTAGCTTTAAACTTACGTGCGTATGATTTCGTTTCACAAGAA 1650 Query 180087 ATCAGAGCAGCAGAAGATCCCGAGTTTGAGACCTTCTACACCAAGAACATTCTTCTCAAT 180146 || | || || ||||| || |||||||| || ||||| || || || |||||| | || Sbjct 1649 ATTCGCGCTGCGGAAGACCCTGAGTTTGAAACTTTCTATACAAAAAATATTCTTTTAAAC 1590 Query 180147 GAAGGACTACGTGCATGGTTGGCACCAGTTGATCAACCACATGAGTCATTCGTATTCCCA 180206 ||||| | ||||| ||| |||| | ||||| || ||||| | | |||||||| Sbjct 1589 GAAGGTATTCGTGCTTGGATGGCTGCTCAAGATCAGCCTCATGAAAAACTAGTATTCCCT 1530 Query 180207 GAAGAAGTTCTGCCAAGAGGTAATGC 180232 || || ||| | ||| | || || || Sbjct 1529 GAGGAGGTTTTACCACGTGGAAACGC 1504 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605999403888480