Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Auxenochlorella_20pyrenoidosa_20[genbank_20GCA_5F001430745.1_202015-
11-03] 1,346 sequences; 56,992,954 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1204 98.7 7e-16
seq12 96.9 2e-15
seq514 91.5 1e-13
>seq1204
Length=1697657
Score = 98.7 bits (108), Expect = 7e-16
Identities = 105/139 (76%), Gaps = 0/139 (0%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || || | ||| | || ||||||||| ||||| |||||| ||||||||||| ||
Sbjct 1370474 CATGCCTCCACGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 1370533
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
||| || ||| | || ||||||||||| ||||||||||| | |||||||| || |
Sbjct 1370534 GGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCGGG 1370593
Query 44227 AGGCACACCTTCCTTTTCC 44245
|| | || ||||| |||
Sbjct 1370594 GGGGATGCCCTCCTTGTCC 1370612
Score = 96.9 bits (106), Expect = 2e-15
Identities = 92/118 (78%), Gaps = 0/118 (0%)
Strand=Plus/Plus
Query 44106 TCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAAT 44165
|||| || || | ||| | || ||||||||| ||||| |||||| ||||||||||| |
Sbjct 1369835 TCATGCCTCCACGCAGGCGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGT 1369894
Query 44166 CGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|||| || ||| | || ||||||||||| ||||||||||| | |||||||| ||
Sbjct 1369895 CGGCCAGGGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTC 1369952
>seq12
Length=2794402
Score = 96.9 bits (106), Expect = 2e-15
Identities = 104/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Minus
Query 44108 ATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCG 44167
|| || || | ||| | || ||||||||| || ||| |||||| ||||||||||| ||
Sbjct 2342314 ATGCCGCCGCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCA 2342255
Query 44168 GCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAA 44227
|| || ||| |||| ||||||||||| ||||| ||||||| |||||||| || |
Sbjct 2342254 GCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGG 2342195
Query 44228 GGCACACCTTCCTTTTCC 44245
|| | || ||||| |||
Sbjct 2342194 GGGATGCCCTCCTTGTCC 2342177
>seq514
Length=2321867
Score = 91.5 bits (100), Expect = 1e-13
Identities = 88/113 (78%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || ||||||||| || || |||||| ||||||||||| |||||
Sbjct 1627207 CCGCCGCGCAGGCGCAGCACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCC 1627148
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| ||| |||| ||||||||||| || || ||||||| ||||||||| ||
Sbjct 1627147 AGGGTGCGGCCGTCCTCCAGCTGCTTGCCCGCGAAGATCAGACGCTGCTGGTC 1627095
Score = 84.2 bits (92), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 44148 CCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGA 44207
|||| ||||||||||| ||||| || ||| |||| ||||||||||| ||||||||||
Sbjct 1624621 CCTTCTGGATGTTGTAGTCGGCCAGGGTGCGGCCGTCCTCCAGCTGCTTGCCGGCAAAGA 1624562
Query 44208 TCAAACGCTGCTGATC 44223
||| ||||||||| ||
Sbjct 1624561 TCAGACGCTGCTGGTC 1624546
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359984494582482
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |