Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq16 104 2e-17 >seq16 Length=955652 Score = 104 bits (114), Expect = 2e-17 Identities = 366/560 (65%), Gaps = 15/560 (3%) Strand=Plus/Minus Query 16964 CATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAAC 17023 || ||||||||||| || || || ||||||| ||||| | ||||| ||||| ||||| Sbjct 698029 CAGGCGAAATCGCAGTGCAACCCTTCGTCTCGACTGATCAACTCGTTGGAAAACGTCAAA 697970 Query 17024 CCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAAT 17083 || |||| ||||| ||||||| |||||| || ||| ||| || ||||| Sbjct 697969 CCTTTCATCAATCCTCTCTTCTTTAGCCAAAAGATGGCGCAGAAACTGCCGCTGAAGAAA 697910 Query 17084 ATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCG-CGTCTTTGTTACG 17142 || || || ||| |||| || ||| ||| |||||||| || ||| || | | || Sbjct 697909 ATGCCTTCCACGCATGCGAAACCGACTAAACGTTCGGCAAACCTCGCCGACGAAGACTCG 697850 Query 17143 AATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGC-CT 17201 ||||||||| | |||| || || || | || | | ||||| | || || | Sbjct 697849 -ATCCATTTCATCGCCCAATCCGCCTTCTTTTTCACGGTTGGAATCGTATGAATCGCTCG 697791 Query 17202 TAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACA 17261 || |||||||||| | | | |||| | | ||||| || | | | |||| Sbjct 697790 AAACAAATTTCTCTTCTGAAT-TGGGTCTTTCACGTACGTCTCTAACAACAACGCGTACG 697732 Query 17262 TTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTA 17321 ||||| ||| || ||||| |||| | |||||| ||||||| || || || | | Sbjct 697731 TTTCGCTGTGAATATTCTCGATGGATTGCTGAAACGCGTAAAACGCTCTCGCCTCGGGAA 697672 Query 17322 TTTGAA---CTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCG 17378 |||| ||| || || || || | || ||| || ||||| ||||| | Sbjct 697671 CCTGAATCTCTTTCA--TA-AACCGCACGCATAAATTCTCCAAGACGATACCGTCCGAGG 697615 Query 17379 CGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG-- 17436 |||||||||||||||| | ||| | || |||| || |||| | | |||| | Sbjct 697614 CGGCGAAAAACGCCAAAACGTGCGTGATAAAATGTTGCTCGTTC--TCGTTCAACGTGAT 697557 Query 17437 CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGC 17496 ||| || | |||| | | | ||| | || || | ||||||||| || ||| | || Sbjct 697556 CCAATCTCTGTAATCGTACGTCAAATCAATCTCCTCCGCGGTCCAAAAGCTCGCCTCCGC 697497 Query 17497 CTTTTTATACATATTCCAAA 17516 || ||||| ||| ||| || Sbjct 697496 TTTCTTATA-ATACTCCCAA 697478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545464144280