Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq1 131 2e-25 >seq1 Length=1352724 Score = 131 bits (144), Expect = 2e-25 Identities = 555/872 (64%), Gaps = 6/872 (1%) Strand=Plus/Plus Query 53783 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 53842 ||||| || || ||||||||||| || ||| ||| ||||||||||| | | ||| Sbjct 25617 TTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCACGCATCCTTGAACAACATG 25676 Query 53843 AATGGCGTACCAGTTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTT 53902 | || |||||||||| | || | ||| | |||||| ||| | | || || Sbjct 25677 TACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAACCAAAGCTGCTGGGCGTTG 25736 Query 53903 ATTATAGATTTGTATC--TCTTTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGT 53960 || | || || | | |||||| ||||||| || ||||| ||||||||| | Sbjct 25737 ATCGTC--TTCTTACCCTTGTTTTCTTTTTCGTACTTGGTGTACAAAGCTTCAAACTCTT 25794 Query 53961 CTCCCCAAACATT-GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCG 54019 | ||||| |||| | ||| || || || || | ||| ||||| |||| ||||| ||| Sbjct 25795 CACCCCAG-CATTCGGACAAACCCGGGCACTCGTTCGGGCACATTAACGTCCACTTGCCG 25853 Query 54020 TCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 54079 | || | |||| |||||| || | ||| |||| | | | ||| | || | Sbjct 25854 TTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAACCGTAAAACAAGTCACGA 25913 Query 54080 GTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 54139 | ||| ||| || || || |||||| | ||||| | | | || ||||| Sbjct 25914 GCTCTCGCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGAG 25973 Query 54140 TGCCACGGTTCCAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATG 54199 ||||||||||| | ||| |||| | | | || || || || || || || | | Sbjct 25974 TGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACG 26033 Query 54200 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 54259 || || || |||| || | || | | ||| ||||| ||||| || || | ||| || Sbjct 26034 TACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTTCGAGGTACCGTTT 26093 Query 54260 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCT 54319 || || || || | |||| || || | ||| || | ||| || || || Sbjct 26094 GTGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGAATAGACAAACCAATACCGCCG 26153 Query 54320 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 54379 || || || || | |||||| || ||||| || ||||| || || || || Sbjct 26154 GCGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTCT 26213 Query 54380 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 54439 ||| ||||| || | ||| || || | ||| | || || || || || || Sbjct 26214 TCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGTCGCGGCGTACCGGCGTTGAAC 26273 Query 54440 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCT 54499 ||||| || || ||||| || | ||| |||||| | | | ||||| || | ||| Sbjct 26274 AAGGTTGGCGACGCGTGGGTCATCCAACGTTCAGACAACATGTGATACGTATCAACAGCC 26333 Query 54500 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 54559 || |||||| | || || || | | || | ||| ||||||||||| || | Sbjct 26334 TTTTCGATATCCTTCTTGTGGATACCGATGGATACTCTCATCAACATGTGCTGCGGGCGC 26393 Query 54560 TCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 54619 || || | || || || || |||||| || ||||||||||| |||||||| Sbjct 26394 TCGACAACTTTACCGTCGATGCGCAACAAGTACGAGCGCTCCAAAGTTTTGAAACCAAAG 26453 Query 54620 TAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 54651 |||| ||| |||||| || ||||| | ||| Sbjct 26454 TAGTCGTAATCAAAGTCACGGTCGTAGACAAT 26485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721444148080