Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq16 91.5 1e-13 seq7 87.8 2e-12 >seq16 Length=955652 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| ||||| || |||||||| || ||||| || || |||| ||| | |||| || Sbjct 707303 CACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTC 707362 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 | ||| || || || |||| | || |||||| ||| || | ||||||||||| Sbjct 707363 TAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTG 707422 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| || || | | ||| || || | ||| ||||| || ||||| || Sbjct 707423 GATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTT 707482 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| || || || ||||| || |||||||| Sbjct 707483 GCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| ||||| || |||||||| || ||||| || || |||| ||| | |||| || Sbjct 707531 CACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTC 707590 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 | ||| || || || |||| | || |||||| ||| || | ||||||||||| Sbjct 707591 TAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTG 707650 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| || || | | ||| || || | ||| ||||| || ||||| || Sbjct 707651 GATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTT 707710 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| || || || ||||| || |||||||| Sbjct 707711 GCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 20966 CACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTC 21025 ||||| ||||| || |||||||| || ||||| || || |||| ||| | |||| || Sbjct 707759 CACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTC 707818 Query 21026 CAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGC 21085 | ||| || || || |||| | || |||||| ||| || | ||||||||||| Sbjct 707819 TAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTG 707878 Query 21086 GATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTT 21145 |||||| || || | | ||| || || | ||| ||||| || ||||| || Sbjct 707879 GATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCCAACGTGATGGTTTT 707938 Query 21146 GCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||| || || || ||||| || |||||||| Sbjct 707939 GCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 >seq7 Length=519835 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 23809 ACGTTGCCCAGGTCGCCGACGTGTCGCTCCGCGGC-GTCGGGCGCGCCGTGTCTCTGGCG 23867 ||||| |||| || ||| |||||| | | | ||||| ||||||||| || Sbjct 84951 ACGTTACCCAAATCCCCGGCGTGTCTGACTGAATCCGTCGG-CGCGCCGTGCGTCATCTT 85009 Query 23868 GGTGGGGTTAAAGTGCTCGCCAGCGGACGTGCAGCCGTTGCTGGTGTCGCCGAATTCGTG 23927 | | |||||||||||| |||| |||| |||| |||||| | ||||| ||||||||||| Sbjct 85010 GTTCGGGTTAAAGTGCGGACCAGTGGACATGCACCCGTTGGTCGTGTCTCCGAATTCGTG 85069 Query 23928 CACGTGAAAACCGTG 23942 |||||| |||||||| Sbjct 85070 CACGTGCAAACCGTG 85084 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| ||| | | ||||| || || |||||||| |||||||||||||| |||||| Sbjct 260359 CCGCCTCTCAGGCGTAACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCC 260418 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | |||| || | |||||| || || | || | | ||||||||| || Sbjct 260419 AAAGTGCGTCCGTCTTCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGGG 260478 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | |||||||||||| ||| || || || | | ||| || || || ||| | Sbjct 260479 ATGCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCCACT 260538 Query 21129 TCCACGGTAATGGTCTTGCCGGT 21151 |||| ||| || || ||||| || Sbjct 260539 TCCAAGGTGATCGTTTTGCCCGT 260561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422259091928036