Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq16 134 1e-26 seq14 116 4e-21 seq12 113 5e-20 seq17 109 6e-19 seq7 109 6e-19 >seq16 Length=955652 Score = 134 bits (148), Expect = 1e-26 Identities = 390/595 (66%), Gaps = 24/595 (4%) Strand=Plus/Plus Query 116615 TTCCCCATACAATACCCGGACATGTGGC-GCATGTACAAAAAGGCCGAGGCGTCGTTCTG 116673 ||||| || |||||||| || ||| | || || || || || |||||| || || Sbjct 697455 TTCCCGATGAAATACCCGAGAATTTGGGAGTAT-TATAAGAAAGCGGAGGCGAGCTTTTG 697513 Query 116674 GACCGTCGAGGAGGTGGACCTGTCCAAGGACACGAGCGACTGGGAGCGC-TTGAACGACA 116732 ||||| |||||| | || || | | || || || ||| | | | |||||||| | Sbjct 697514 GACCGCGGAGGAGATTGATTTGACGTACGATTACAGAGATTGG-ATCACGTTGAACGAGA 697572 Query 116733 ACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCA 116792 |||||| ||||| |||| |||||| |||| |||||||||||| ||||| |||||| Sbjct 697573 ACGAGCAACATTTTATCACGCACGTTTTGGCGTTTTTCGCCGCCTCGGACGGTATCGTCT 697632 Query 116793 ACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCT 116852 |||||| | || ||| || | ||| | ||||| |||||||| | || | Sbjct 697633 TGGAGAATTTATGCGTGCGGTTTATGAAAGAGATTCAGGTTCCCGAGGCGAGAGCGTTTT 697692 Query 116853 ACGGCTTTCAGATCGCCATGGAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACA 116912 ||| |||||| |||| ||||| | ||| |||| ||| || | | || | Sbjct 697693 ACGCGTTTCAGCAATCCATCGAGAATATTCACAGCGAAACGTACGCGTTGTTGTTAGAGA 697752 Query 116913 CGTACGTG-----CGCTCTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGAT 116967 |||||||| | | ||| || ||||| |||||| || || | ||||| Sbjct 697753 CGTACGTGAAAGACCCAATTCAGAAGAGAA-----ATTTGTTTCGAGCGATTCATACGAT 697807 Query 116968 GCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGGATCG-----CCGGCAGAGAG 117022 || ||| ||| ||||||| || |||||| || ||||||| || | | ||| Sbjct 697808 TCCAACCGTGAAAAAGAAGGCGGATTGGGCGATGAAATGGATCGAGTCTTCGTCGGCGAG 697867 Query 117023 GCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGC 117082 | || | ||| || | || | ||||| ||| || ||| | ||||| ||| Sbjct 697868 G-----TTTGCCGAACGTTTAGTCGGTTTCGCATGCGTGGAAGGCATTTTCTTCAGCGGC 697922 Query 117083 AGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGC 117142 |||||| |||||| |||||||| ||||| | || | ||| || |||| || | Sbjct 697923 AGTTTCTGCGCCATCTTTTGGCTAAAGAAGAGAGGATTGATGAAAGGTTTGACGTTTTCC 697982 Query 117143 AACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGT 117197 |||||| | ||| | ||||| || |||| ||||| || ||||| ||||| Sbjct 697983 AACGAGTTGATCAGTCGAGACGAAGGGTTGCACTGCGATTTCGCCTGCGAGCTGT 698037 Score = 125 bits (138), Expect = 7e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || |||||||||||||| | || ||||| | || Sbjct 707740 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707681 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || ||||| |||| || Sbjct 707680 GACACCATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCA 707622 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | || | ||| || || ||| | || |||| | || | ||| ||||| Sbjct 707621 GCAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAA 707562 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | ||| |||| | |||||||| ||||| ||||| Sbjct 707561 CATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTGAGAGGCGG 707514 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || |||||||||||||| | || ||||| | || Sbjct 707512 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTCGAGTCTTCC 707453 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || ||||| |||| || Sbjct 707452 GACACCATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCA 707394 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | || | ||| || || ||| | || |||| | || | ||| ||||| Sbjct 707393 GCAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAA 707334 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCG 40918 ||||||||||||| | ||| |||| | |||||||| || | ||||||| Sbjct 707333 CATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTACGAGGCGGCG 707284 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || | || |||||||||||||| | || || || | || Sbjct 707968 ATGCAAATCTTCGTCAAGACTTTGACTGGCAAAACCATCACGTTGGAAGTTGAGTCTTCC 707909 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| |||||| || || | ||||| || || ||||| |||| || Sbjct 707908 GACACCATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAAGGTATCCCGCCGGATCA 707850 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | || | ||| || || ||| | || |||| | || | ||| ||||| Sbjct 707849 GCAGCGATTGATTTTCGCCGGTAAGCAGTTAGAAGACGGCAGAACGTTGGCCGATTACAA 707790 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| | ||| |||| | |||||||| ||||| ||||| Sbjct 707789 CATCCAGAAGGAGTCTACGTTGCACTTGGTGTTGCGTTTGAGAGGCGG 707742 >seq14 Length=1037991 Score = 116 bits (128), Expect = 4e-21 Identities = 267/393 (68%), Gaps = 12/393 (3%) Strand=Plus/Minus Query 117027 CCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTT 117086 |||||| ||| || |||| || ||||| |||||| ||| ||||||| || ||| || Sbjct 66346 CCTTCGCCGAACGTTTGGTCGCGTTCGCCTGCGTCGAAGGCATCTTCTTCTCCGGCTCTT 66287 Query 117087 TCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACG 117146 || | | || | ||||||||||| | ||| | ||||| || || || ||| ||||| Sbjct 66286 TCTGCTCAATCTACTGGCTCAAGAAGAGAGGCATGATGCCGGGGCTCACCTTCTCCAACG 66227 Query 117147 AGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATT 117206 || | |||||||| ||||| ||| |||| | || ||||| || ||||| | || | || Sbjct 66226 AGTTGATCTCCAGAGACGAAGGTTTGCACAGAGATTTTGCGTGCTTGCTTTACACG-ATG 66168 Query 117207 TGGTGCAGC-GACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATC 117265 | | || | ||| ||| || | | || |||| || ||||| ||||| | || Sbjct 66167 TTGAACAACACGCCGGGCGAGGAGAAGTTGAGAAAGATTGTTACCGAGGCGGTTGAAATT 66108 Query 117266 GAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAAC 117324 ||| || || | ||| ||| |||| ||||| || | || | || ||| | Sbjct 66107 GAGAAGGAGTTTGTGTGCGACGCGTTGCC-GTGCGCGCTCGTCGGCATGAACGCCGACAT 66049 Query 117325 GATGTCGCAATACATCGAGTTCGTCGCCGA-CAGGCTGCTGCTCGAGCTGGTCGGC---G 117380 |||| | |||||||||| ||| ||||| || || ||||| || | ||||| | Sbjct 66048 GATGAGAGATTACATCGAGTACGTTGCCGATCA--CT--TGCTCTCGCAGCTCGGCTTTG 65993 Query 117381 CCAAGCACTACAACACGCCCAACCCGCTGGACT 117413 | ||| | ||| |||| | |||||| | |||| Sbjct 65992 CGAAGGAGTACGACACCGCGAACCCGTTCGACT 65960 >seq12 Length=1122692 Score = 113 bits (124), Expect = 5e-20 Identities = 156/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 40705 AAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AAC 40763 ||||| | || || ||||||||||| |||| ||||| || | |||| | | ||| Sbjct 917153 AAAACTTTGACTGGGAAAACCATCACGCTCGAAGTCGAGTCCTCGGACACGATCGACAAC 917094 Query 40764 GCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTA 40823 | | || | ||||||| ||||| |||||||| || |||||||||| ||| | || | Sbjct 917093 G-TGAAAGCGAAAATTCAAGACAAGGAGGGCATTCCGCCGGACCAGCAGCGATTGATTTT 917035 Query 40824 CGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGC 40883 ||| || |||||| | || |||| | | || ||| || ||||||||||| || || | Sbjct 917034 CGCCGGTAAACAGTTAGAAGACGGGAGAACTCTCGCGGATTACAACATCCAAAAAGAATC 916975 Query 40884 CACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 || |||| | |||||||| ||| | |||||||| Sbjct 916974 AACCTTGCACTTGGTGTTGCGTTTGCGAGGCGGCGG 916939 >seq17 Length=937610 Score = 109 bits (120), Expect = 6e-19 Identities = 156/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 40702 GTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA- 40760 ||| || |||||||||||| || |||||| |||| ||||| | | |||| | | Sbjct 351539 GTATAACAGCTCACGGGCAAGACGATCACCCTCGAAGTCGAGTCTTCGGACACTATCGAC 351480 Query 40761 AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCAT 40820 |||| |||||| ||||| | ||||||||||||||||| |||| ||||| ||| | || Sbjct 351479 AACG-TCAAGGCGAAAATCCAAGACAAAGAGGGCATCCCGCCGGATCAGCAGCGATTGAT 351421 Query 40821 CTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGA 40880 || ||| || ||||| | || || | || || | |||||| ||||| || || || Sbjct 351420 CTTCGCCGGAAAACAATTAGAAGATGGCCGAACTTTAGCCGACTATAACATTCAAAAAGA 351361 Query 40881 GGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||| |||| | || ||||| ||| | |||||| Sbjct 351360 ATCCACCTTGCACTTGGTCTTGCGTTTGCGCGGCGGC 351324 >seq7 Length=519835 Score = 109 bits (120), Expect = 6e-19 Identities = 148/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGT-GCAAACGCTCAAGGA 40772 ||||||||||| |||||| | || || ||| || | |||| | | | |||| |||||| Sbjct 260561 ACGGGCAAAACGATCACCTTGGAAGTGGAATCCTCGGACACCATCGACAACG-TCAAGGC 260503 Query 40773 AAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAA 40832 ||||| | ||||| || |||||||| | |||||||| || | |||| ||| || || Sbjct 260502 GAAAATCCAAGACAAGGAAGGCATCCCTCCTGACCAGCAGCGGTTGATCTTCGCCGGGAA 260443 Query 40833 ACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| | || |||| ||||| | || || ||||| || || ||| ||||| | || Sbjct 260442 ACAGTTAGAAGACGGACGCACTTTGGCGGATTATAACATTCAAAAAGAGTCCACGTTACA 260383 Query 40893 TCTAGTGTTGCGCTTGAGGGGCGG 40916 | ||||| ||| |||| ||||| Sbjct 260382 CTTGGTGTTACGCCTGAGAGGCGG 260359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219064754960