Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq13 147 2e-30 >seq13 Length=1091008 Score = 147 bits (162), Expect = 2e-30 Identities = 406/620 (65%), Gaps = 2/620 (0%) Strand=Plus/Plus Query 19982 GAACCGGAACTGGAACGTTATCTGTATTTGGAATGCAATCT-CGATATAACTTGAGAAAT 20040 |||| ||||| || || | ||| |||||| ||| | ||||| |||||||| Sbjct 667123 GAACTGGAACCGGGACTATTTCTAAATTTGGT-TGCTCCATGCGATACGACTTGAGACGA 667181 Query 20041 GAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAGAGTTATTA 20100 ||||| || || || | ||||| || ||||||| |||||| | |||||||| || Sbjct 667182 TCGTTTCCGTTGTTGACGAGTAAACGTGTTTTTTGGAGAGGCGTGGCGGAAGAGTTGTTG 667241 Query 20101 TGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGGAGTTAAGATTTGG 20160 ||||| | || || ||||| || | | |||| | ||||||||| || |||||| Sbjct 667242 TGGTTCGTGAAGGGTTCAACGAACGCGAACGAGTTGAAAGAAAAAGGCGTCGGCATTTGG 667301 Query 20161 AGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCGTCAAGAGGGG 20220 || | | ||| | | | ||| || || ||||| || |||| ||| | Sbjct 667302 GACGGAAACGGAAGTCGCGAGTATTTGGACTCCATCGGATTAAACCACCGCGAAGTGAAC 667361 Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280 ||||| || || || || || || ||||||||||| || || || || |||||| Sbjct 667362 GATTTAGGCCCAGTCTACGGCTTCCAATGGAGACACTTCAACGCCGAGTACACCGACATG 667421 Query 20281 AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATTAAA 20340 || | | || || |||| || || ||| | | || ||| | ||| ||| Sbjct 667422 CACGCCGACTACGCCGGTAAAGGCGTCGACCAACTCGCCGAAGTGATTCACAAAATCAAA 667481 Query 20341 ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTTA 20400 | || |||||||| || | ||| ||||| ||| |||||| | | || | Sbjct 667482 AACAATCCAAACGATCGACGCATTCTTTTAACCGCGTGGAACCCAGCCGCGTTGAAAGAA 667541 Query 20401 ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAATTGTCG 20460 ||||| ||||| || ||||| ||| | || ||||| ||||| || || || ||| Sbjct 667542 ATGGCGTTGCCGCCGTGTCACATGTTCTGTCAATTCTACGTCGCGAACGGAGAGTTGAGT 667601 Query 20461 TGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATTGCAAGT 20520 || |||||||| ||||| || || |||||| | || || || ||||| ||||| ||| Sbjct 667602 TGCCAAATGTACCAACGCTCGTGCGACATGGGATTAGGCGTCCCGTTCAACATTGCCAGT 667661 Query 20521 TATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAACGGGTGACTTAGTC 20580 || || || | || | ||||| || || || || | ||| |||| || || ||| Sbjct 667662 TACTCGTTGTTAACATGCATGATCGCGCAAGTCTGCGACCTGAAACCGGGAGATTTTGTC 667721 Query 20581 CACACCATAGGAGACGCGCA 20600 ||| | || |||||||| Sbjct 667722 CACGTGCTCGGCGACGCGCA 667741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399183897833845