Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq1 136 8e-27 seq2 125 2e-23 >seq1 Length=1352724 Score = 136 bits (150), Expect = 8e-27 Identities = 405/617 (66%), Gaps = 7/617 (1%) Strand=Plus/Minus Query 248794 ATTGACTACGGCAAAGATTTGGAGTACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCG 248853 |||| ||||| | || || || ||||| | ||||| ||||||||| ||||| ||| Sbjct 26485 ATTGTCTACGACCGTGACTTTGATTACGACTACTTTGGTTTCAAAACTTTGGAGCGCTCG 26426 Query 248854 TATCTCCTCAAAATTGATGGCAAGATCGTGGAACGAATTCAGCACATGTTGATGCGAGTG 248913 || | | || || || || | || || || ||||||||||||||| |||| Sbjct 26425 TACTTGTTGCGCATCGACGGTAAAGTTGTCGAGCGCCCGCAGCACATGTTGATGAGAGTA 26366 Query 248914 GCTGTCGGGATTCACAAGGATGACATAGAGAGCGTGCTCGAGACGTA-CACCGGAATGAG 248972 | |||| || |||||| | || || || | | | || ||||| ||| | || Sbjct 26365 TCCATCGGTATCCACAAGAAGGATATCGAAAAGGCTGTTGATACGTATCACATGT-TGTC 26307 Query 248973 TGAACGCTGGATGACACATGCCACACCGACGCTCTTCAACGCCGGTAC-CGTCAACAATC 249031 |||||| |||||||| || || | || || | |||||||||||||| | | || | Sbjct 26306 TGAACGTTGGATGACCCACGCGTCGCCAACCTTGTTCAACGCCGGTACGCCGCGAC-CGC 26248 Query 249032 AGCTGAGCTCGTGCTTTCTTCTTGCCATGCAAGACGACTCTGTCGACGGCATTTATGACA 249091 | || |||||||||| | || |||| | || ||||| | || || || || |||| Sbjct 26247 AACTCTCCTCGTGCTTTTTGATTTGCATGAAGGAAGACTCCATTGAAGGTATCTACGACA 26188 Query 249092 CGCTTAAACAGACGGCGAAGATTTCTAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCA 249151 || | || | ||| ||||| || | ||| ||||| || ||| | || | | Sbjct 26187 CGTTGAAGGAATGCGCGTGCATTTCCAAGTCCGCCGGCGGTATTGGTTTGTCTATTCACG 26128 Query 249152 ACATCCGAGCGAAGGGTTCGTACATCAAAGGTACAAATGGGGTCAGTGATGGTATCGTAC 249211 ||||||| || | |||||||| | ||| ||||| || | | |||||| | | Sbjct 26127 ACATCCGCGCCACTTCGTCGTACATTAGAGGCACAAACGGTACCTCGAACGGTATCATTC 26068 Query 249212 CCCTCCTTCGATGCTTTGAGTCCACCGCCAGGTTCATCAACC-AGGC--CGGGCGCCGAA 249268 | | ||||| || | ||| || |||| | | ||| |||| ||| || | Sbjct 26067 CGATGCTTCGCGTGTTCAACGACACGGCGAGGTACGTGGACCAAGGCGGCGGTAAGCGCA 26008 Query 249269 AGGGGTCGTTCGCCATGTATTTGGAAGTGTGGCACGCCGATATATTGGAGTTCCTGGACT 249328 |||| | || ||||| || | ||| ||||||| | || || || || | || |||| Sbjct 26007 AGGGCGCTTTTGCCATTTACCTCGAACCGTGGCACTCTGACATCTTCGACTGGCTCGACT 25948 Query 249329 TGAAAAAGAACAACGGCAACGAGCTCATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGG 249388 || ||||||| |||| || || |||||| |||||| | || ||||| ||||| Sbjct 25947 TGCGAAAGAACCACGGGAAGGAAGAAGCGAGAGCTCGTGACTTGTTTTACGGTTTGTGGA 25888 Query 249389 TCTCCGACTTGTTCATG 249405 ||| ||||||||| Sbjct 25887 CGAACGATTTGTTCATG 25871 >seq2 Length=794368 Score = 125 bits (138), Expect = 2e-23 Identities = 138/183 (75%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 254195 ACCCGGCTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGA 254254 ||||| |||||||| | ||| | |||| | ||||| ||||| | |||||| ||| Sbjct 644860 ACCCG--TGTCCGCCGTATAAGATTCTGATTTTAGACGAAGCGGATTCGATGACGAACGA 644803 Query 254255 CGCGCAGTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCT 254314 ||||||||| || || || |||| |||||| ||| ||||| |||||||| |||| | | Sbjct 644802 CGCGCAGTCGGCGCTGCGACGAATGATGGAAACGTACTCCAGAGTGACGCGATTTTTCAT 644743 Query 254315 GGTGTGCAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCG 254374 |||| ||||||||| || || || | |||| | ||||||| ||||| |||||||| Sbjct 644742 CCTGTGTAACTACGTGAGCAAAATTATAGACCCGATTTCTTCTCGATGCGCAAAGTTTCG 644683 Query 254375 ATT 254377 ||| Sbjct 644682 ATT 644680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073766111089728