Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq13 132 4e-26 >seq13 Length=1091008 Score = 132 bits (146), Expect = 4e-26 Identities = 388/593 (65%), Gaps = 10/593 (2%) Strand=Plus/Minus Query 20928 GGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGG 20987 || || ||||||||| ||| ||||| ||||| || | ||| ||||| |||||||| Sbjct 667765 GGTTCGACGTGGTTGGCGTACACGTGCGCGTCGCCGAGCACGTGGACAAAATCTCCCGGT 667706 Query 20988 GTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAAC 21047 ||||| | ||| || ||||||| | || | | | ||| ||||| ||||| ||| Sbjct 667705 TTCAGGTCGCAGACTTGCGCGATCATGCATGTTAACAACGAGTAACTGGCAATGTTGAAC 667646 Query 21048 GGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGA 21107 ||||| || | ||||||||| || | ||||||| ||||| || ||| || Sbjct 667645 GGGACGCCTAATCCCATGTCGCACGAGCGTTGGTACATTTGGCAACTCAACTCTCCGTTC 667586 Query 21108 GCCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC-CGCGCGAGGTCCGC 21166 || ||||| || ||||| || | |||||| || || | ||||| | | | | | || Sbjct 667585 GCGACGTAGAATTGACAGAACATGTGACACGGCGGCAACGCCATTTCTTTCAACG-CGGC 667527 Query 21167 GGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAATTAGATCCAC 21226 |||||||||||| | || ||||| ||||||| || | || ||| | | Sbjct 667526 TGGGTTCCACGCGGTTAAAAGAATGCGTCGATCGTTTGGATTGTTTTTGATTTTGTGAAT 667467 Query 21227 CACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTC 21286 ||| | || ||||| || || | ||| |||||| ||||| | ||||||| Sbjct 667466 CACTTCGGCGAGTTGGTCGACGCCTTTACCGGCGTAGTCGGCGTGCATGTCGGTGTACTC 667407 Query 21287 CGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCG---CCCTCGCGGCG 21343 || || |||||||| ||||| ||||| || || || | |||| | |||||| | Sbjct 667406 GGCGTTGAAGTGTCTCCATTGGAAGCCGTAGACTGGGCCTAAATCGTTCACTTCGCGGTG 667347 Query 21344 GTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTTTAC 21403 || || || | ||||| | |||| |||| |||||||||| || Sbjct 667346 GT---TTAATCCGATGGAGTCCAAATACTCGCGACTTCCGTTTCCGTCCCAAATGCCGAC 667290 Query 21404 GCCGCGGCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACTCCTC 21463 ||| || ||| | | || || || ||| | | ||||||| |||||| || Sbjct 667289 GCCTTTTTCTTTCAACTCGTTCGCGTTCGTTGAACCCTTCACGAACCACAACAACTCTTC 667230 Query 21464 CACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGGAAAC--TCGTC 21514 | | ||||| |||||||| || | ||| | || |||| |||||| ||||| Sbjct 667229 CGCCACGCCTCTCCAAAAAACACGTTTACTCGTCAACAACGGAAACGATCGTC 667177 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427775890516080