Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq16 123 2e-23 seq7 109 5e-19 seq17 93.3 4e-14 >seq16 Length=955652 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||||||||||||||| || ||||| | ||||||||| || || ||||| |||||| Sbjct 707285 GCCGCCTCGTAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGC 707344 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 || || || |||||| | ||| ||||| || | |||| || |||||||| || || Sbjct 707345 CAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 707404 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 || ||||| ||||| ||| || || | | || | ||||||| | ||| || Sbjct 707405 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGAC 707464 Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764 || | || | || ||||| ||||| || || ||||| |||||||| Sbjct 707465 TTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 >seq7 Length=519835 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594 || ||||||| | || || || ||||| | ||| ||||||||||||||||||||||| Sbjct 260356 TGCCCGCCTCTCAGGCGTAACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCC 260415 Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654 || |||| |||||| | |||||| || || |||||| || ||||| || ||| Sbjct 260416 GCCAAAGTGCGTCCGTCTTCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGA 260475 Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCC 139714 || |||||||| ||||| |||||| || | | || | ||||| | || ||| Sbjct 260476 GGGATGCCTTCCTTGTCTTGGATTTTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCC 260535 Query 139715 ACCTCAACGGTCACCGTCTTGCCGGTCA 139742 || || | ||| | ||| ||||| |||| Sbjct 260536 ACTTCCAAGGTGATCGTTTTGCCCGTCA 260563 >seq17 Length=937610 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 139537 GCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCT 139596 |||||| || |||||||| || ||||| | || || ||||||||||||||||| ||| Sbjct 351324 GCCGCCGCGCAAACGCAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCGGC 351383 Query 139597 CATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 139656 | || | ||||| | ||||| || || |||||| || |||||||| || || Sbjct 351384 TAAAGTTCGGCCATCTTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGCGG 351443 Query 139657 TATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716 ||||| |||||||| |||||| || | | || | ||||| | | ||| || Sbjct 351444 GATGCCCTCTTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTGTCCGAAGACTCGAC 351503 Query 139717 CTCAACGGTCACCGTCTTGCCGGT 139740 || | ||| | ||||||||| || Sbjct 351504 TTCGAGGGTGATCGTCTTGCCCGT 351527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496063869783200