Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq1 150 3e-31 >seq1 Length=1352724 Score = 150 bits (166), Expect = 3e-31 Identities = 564/879 (64%), Gaps = 4/879 (0%) Strand=Plus/Plus Query 79693 TTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 79752 || || || || ||||||||||| || ||| ||| ||||||||||| | | ||| Sbjct 25617 TTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCACGCATCCTTGAACAACATG 25676 Query 79753 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTT 79811 |||| |||||||||| | || | ||| | |||||| ||| | | || | || || Sbjct 25677 TACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAACCAAAGCTGCTGG-GCGTT 25735 Query 79812 TATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTC 79871 || | ||| | |||||| ||||||| | || || || ||| ||||| || Sbjct 25736 GATCGTCTTCTTACCCTTGTTTTCTTTTTCGTACTTGGTGTACAAAGCTTCAAACTCTTC 25795 Query 79872 TCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCATC 79931 ||||| ||| || || || || |||| || ||||| |||| ||||| || | Sbjct 25796 ACCCCAGCATTCGGACAAACCCGGGCACTCGTTCGGGCACATTAACGTCCACTTGCCGTT 25855 Query 79932 ATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGT 79991 || | |||| |||||| || | ||| |||| | | | ||| | || | | Sbjct 25856 TTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAACCGTAAAACAAGTCACGAGC 25915 Query 79992 TCTATGCTCCTCGTTTCCTGTA-TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAAT 80050 ||| ||| || |||| || |||||| | ||||| | | | || ||||| | Sbjct 25916 TCTC-GCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGAGT 25974 Query 80051 GCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGT 80110 |||||||||| | ||| ||||| | | | ||| || || || || || || | || Sbjct 25975 GCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACGT 26034 Query 80111 ATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGG 80170 | || || |||| || | || | | ||| ||||| ||||| || || ||||| || | Sbjct 26035 ACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTTCGAGGTACCGTTTG 26094 Query 80171 TCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTG 80230 | || || || | |||| || || | ||| || | ||| || || || | Sbjct 26095 TGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGAATAGACAAACCAATACCGCCGG 26154 Query 80231 CCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCAT 80290 | || || || | |||||| || ||||| || ||||| || || ||| || | Sbjct 26155 CGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTCTT 26214 Query 80291 CAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATA 80350 | ||||| || | ||| || || | ||| | || || || || || || | Sbjct 26215 CCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGTCGCGGCGTACCGGCGTTGAACA 26274 Query 80351 AGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTG 80410 |||| || || ||||| || | ||| |||||||| | | ||||| |||| ||| Sbjct 26275 AGGTTGGCGACGCGTGGGTCATCCAACGTTCAGACAACATGTGATACGTATCAACAGCCT 26334 Query 80411 ATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTT 80470 ||| |||||| | || || || | | || | ||| ||||||||||| || | | Sbjct 26335 TTTCGATATCCTTCTTGTGGATACCGATGGATACTCTCATCAACATGTGCTGCGGGCGCT 26394 Query 80471 CAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAAT 80530 | || | || | || ||||||||| || ||||||||||| |||||||| | Sbjct 26395 CGACAACTTTACCGTCGATGCGCAACAAGTACGAGCGCTCCAAAGTTTTGAAACCAAAGT 26454 Query 80531 AGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 80569 ||| ||| |||||| || ||||| | ||| ||| || Sbjct 26455 AGTCGTAATCAAAGTCACGGTCGTAGACAATTTCCGCGT 26493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268611454440