Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq16 118 8e-22 >seq16 Length=955652 Score = 118 bits (130), Expect = 8e-22 Identities = 166/233 (71%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 42877 TCGTCGCCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAA 42936 || ||||| || || | | |||||||| || | || |||||| || | |||||| Sbjct 707280 TCTTCGCCGCCTCGTAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAA 707339 Query 42937 TCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCG 42996 |||| ||| || | |||| || || || || ||||| |||||||||||||| ||||| Sbjct 707340 TCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCC 707399 Query 42997 GCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCC 43056 | ||| | |||||| || || |||| | | ||||| || | | |||||| || | Sbjct 707400 GGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGAC 707459 Query 43057 TCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 ||||| || | ||| || ||||| || || | ||| || || || |||||||| Sbjct 707460 TCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 |||||||| || | || |||||| || | |||||||||| ||| || | |||| Sbjct 707529 AACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCT 707588 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 || || || || ||||| |||||||||||||| ||||| | ||| | |||||| || || Sbjct 707589 TCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCT 707648 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 |||| | | ||||| || | | |||||| || |||||| || | ||| || ||| Sbjct 707649 TGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTT 707708 Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || | ||| || || || |||||||| Sbjct 707709 TTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 |||||||| || | || |||||| || | |||||||||| ||| || | |||| Sbjct 707757 AACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCT 707816 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 || || || || ||||| |||||||||||||| ||||| | ||| | |||||| || || Sbjct 707817 TCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCT 707876 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 |||| | | ||||| || | | |||||| || ||| || || | ||| || ||| Sbjct 707877 TGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCCAACGTGATGGTT 707936 Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || || || | ||| || || || |||||||| Sbjct 707937 TTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369502393218