Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq1 158 2e-33 >seq1 Length=1352724 Score = 158 bits (174), Expect = 2e-33 Identities = 563/872 (65%), Gaps = 6/872 (1%) Strand=Plus/Plus Query 71776 TTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATA 71835 ||||| || || ||||||||||| || ||| ||| ||||||||||| | | || Sbjct 25617 TTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCACGCATCCTTGAACAACATG 25676 Query 71836 AACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTT 71894 |||| |||||||||| | || | ||| | |||||| ||| | | || | || || Sbjct 25677 TACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAACCAAAGCTGCTGG-GCGTT 25735 Query 71895 TATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTC 71954 || | ||||| | |||||| ||||||| | || || || ||| ||||| || Sbjct 25736 GATCGTCTTCTTACCCTTGTTTTCTTTTTCGTACTTGGTGTACAAAGCTTCAAACTCTTC 25795 Query 71955 TCCCCAAGCATT-GTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCAT 72013 ||||| ||||| | || || || || || ||||| ||||| || | ||||| || | Sbjct 25796 ACCCCA-GCATTCGGACAAACCCGGGCACTCGTTCGGGCACATTAACGTCCACTTGCCGT 25854 Query 72014 CATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGG 72073 || | |||| |||||| || | ||| |||| | | | ||| | || | | Sbjct 25855 TTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAACCGTAAAACAAGTCACGAG 25914 Query 72074 TTCTATGCTCCTCGTTTCCTGTA-TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 72132 ||| ||| || |||| || |||||| | ||||| | | | || ||||| Sbjct 25915 CTCTC-GCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGAG 25973 Query 72133 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATG 72192 ||||||||||| | ||| ||||| | | | ||| || || || || || || | | Sbjct 25974 TGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACG 26033 Query 72193 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 72252 || || || |||| || | || | | ||| ||||| ||||| || || | ||| || Sbjct 26034 TACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTTCGAGGTACCGTTT 26093 Query 72253 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCT 72312 || || || || | |||| || || | | ||| || | ||| || || || Sbjct 26094 GTGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGAATAGACAAACCAATACCGCCG 26153 Query 72313 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCA 72372 || || || || | |||||| || ||||| || ||||| || || || || Sbjct 26154 GCGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTCT 26213 Query 72373 TCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAAT 72432 ||| ||||| || | ||| || || | ||| | || || || || || || Sbjct 26214 TCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGTCGCGGCGTACCGGCGTTGAAC 26273 Query 72433 AAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCT 72492 ||||| || || ||||| || | ||| |||||||| | | ||||| |||| ||| Sbjct 26274 AAGGTTGGCGACGCGTGGGTCATCCAACGTTCAGACAACATGTGATACGTATCAACAGCC 26333 Query 72493 GATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTT 72552 ||| |||||| | || || || | | || | ||| ||||| ||||| || | Sbjct 26334 TTTTCGATATCCTTCTTGTGGATACCGATGGATACTCTCATCAACATGTGCTGCGGGCGC 26393 Query 72553 TCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 72612 || || | || | || ||||||||| || ||||||||||| |||||||| Sbjct 26394 TCGACAACTTTACCGTCGATGCGCAACAAGTACGAGCGCTCCAAAGTTTTGAAACCAAAG 26453 Query 72613 TAGTTGTATGAAAAGTCTCGTTCGTAAATAAT 72644 |||| ||| |||||| || ||||| | ||| Sbjct 26454 TAGTCGTAATCAAAGTCACGGTCGTAGACAAT 26485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139023825960