Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq1 141 1e-28 >seq1 Length=1352724 Score = 141 bits (156), Expect = 1e-28 Identities = 321/474 (68%), Gaps = 8/474 (2%) Strand=Plus/Minus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 || |||||| ||| || |||||| | ||| | ||| | ||||| |||||| | ||| Sbjct 26026 CAAGGCGGCGGTAAGCGCAAGGGCGCTTTTGCCATTTACCTCGAACCGTGGCACTCTGAC 25967 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 | || |||| |||| |||| || ||| || ||||| || |||| | ||| Sbjct 25966 ATCTTCGACTGGCTCGACTTGCGAAAGAACCACGGGAAGGAAGAAGCGAGAGCTCGTGAC 25907 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055 |||||||| | | ||| | |||||||||||||| | ||| | || ||| | Sbjct 25906 TTGTTTTACGGTTTGTGGACGAACGATTTGTTCATGAAAAGAGTCGAAGAAAACGGCAAG 25847 Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115 |||| |||||||||| || || || ||| ||||||| |||||||| ||||||||| Sbjct 25846 TGGACGTTAATGTGCCCGAACGAGTGCCCGGGTTTGTCCGAATGCTGGGGTGAAGAGTTT 25787 Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGC--CGATACGTGAGACGAGTCGATGCAC 97173 || || |||||| ||||| |||| | | || | |||||| || | || | Sbjct 25786 GAAGCTTTGTACACCAAGTACGAAAAAGAAAACAAGGGTAAG-AAGACGA-TCAACGCCC 25729 Query 97174 GAGAACTGTGGAAGGCCA-TCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTC 97232 | || ||| || | || ||| || || || || ||||| | |||||||| | Sbjct 25728 AGCAGCTTTGGTTTGCGATTCTTGA-AGCGCAAGTGGAAACTGGTAACCCGTACATGTTG 25670 Query 97233 TACAAGGATACCGTG-AATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTC 97291 | ||||||| |||| || ||||| ||||||| | |||||||| ||||| || Sbjct 25669 TTCAAGGAT-GCGTGCAACCGCAAGTCGAACCAACAAAATTTGGGCACGATCAAATCGTC 25611 Query 97292 CAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345 ||| ||||||| || || || || | | |||| ||||| || || || ||||| Sbjct 25610 CAACTTGTGCACAGAGATCGTCGAATTCACCTCGCCGGAAGAAACTGCCGTTTG 25557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741059005471960