Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq12 100 2e-16 seq16 89.7 4e-13 >seq12 Length=1122692 Score = 100 bits (110), Expect = 2e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||| |||| ||| | || || || || | ||| || |||||||| ||||||||||| Sbjct 916941 GCCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGC 917000 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 ||| ||||| |||||||||| ||||| || ||| | ||||| || || ||||| || Sbjct 917001 GAGAGTTCTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGG 917060 Query 15256 AATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTA 15314 ||| || || ||||| |||||| ||| || || | || || || || || | Sbjct 917061 AATGCCCTCCTTGTCTTGAATTTTCGCT-TTCACGTTGTCGATCGTGTCCGAGGACTCGA 917119 Query 15315 CATCTAAGGTAATGGTTTTACCTGTCAGAGTTTT 15348 | || | || |||||||| || |||| |||||| Sbjct 917120 CTTCGAGCGTGATGGTTTTCCCAGTCAAAGTTTT 917153 >seq16 Length=955652 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | || || || || | || || || || || |||||||||||| Sbjct 707514 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707573 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| |||||||||| || || || ||| | ||||| || || || || || Sbjct 707574 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707633 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || || ||| || | || ||||| ||| | || || Sbjct 707634 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACT 707693 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||||||| || |||| ||| || || || |||||||| Sbjct 707694 TCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || |||||||| | || || || || | || || || || || |||||||||||| Sbjct 707742 CCGCCTCTCAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707801 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| |||||||||| || || || ||| | ||||| || || || || || Sbjct 707802 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707861 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||| ||||| || || ||| || | || ||||| ||| | || || Sbjct 707862 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACT 707921 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||||||| || |||| ||| || || || |||||||| Sbjct 707922 TCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15136 GCCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCT 15195 ||| |||| || | || || || || | || || || || || |||||||||||| Sbjct 707285 GCCGCCTCGTAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGC 707344 Query 15196 TAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGG 15255 | |||| |||||||||| || || || ||| | ||||| || || || || || Sbjct 707345 CAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGG 707404 Query 15256 AATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| ||||| || || ||| || | || ||||| ||| | || || Sbjct 707405 GATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGAC 707464 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || || |||||||| || |||| ||| || || || |||||||| Sbjct 707465 TTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179107304761