Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq4 89.7 4e-13 >seq4 Length=712459 Score = 89.7 bits (98), Expect = 4e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 5496 TGCGCACGCCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCA 5555 ||| ||| || ||||| ||||| ||||| ||||| | ||||| | |||| | | | Sbjct 35377 TGCTCACTCCGGTGGAACCGAAACCGCCGGCGCCGCGCTCCGTCGCTTCCAAGTCTTCGA 35318 Query 5556 CCTCTTC-CACATCGGGGAACGCAGCGCGCTCGCAGATCAGCTGCGCTATTCGGTCGCCC 5614 | || | ||| ||| | | | | | ||| |||||| || || ||||||||||| Sbjct 35317 CTTCCACGCACTCCGGCGTAGTGATC-CTCTCCAAGATCATTTGTGCGATTCGGTCGCCT 35259 Query 5615 GTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGCACCACGCCCACGTTGCCGCGG 5674 |||| ||||| ||||| | || || |||||| || | ||||| ||||| |||||| Sbjct 35258 TTCTTCACCTCAAAATCCTCGTCTCCAAAGTTGGCCAAAATAACGCCGACGTTCCCGCGG 35199 Query 5675 TAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAA 5712 || ||| || | |||||| || ||||||||||| Sbjct 35198 TAATCGTAATCCACCACGCCGGCTAAGACGTCGATGAA 35161 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054289932952