Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq16 107 2e-18 >seq16 Length=955652 Score = 107 bits (118), Expect = 2e-18 Identities = 142/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || ||||||||||| ||||| || |||| || | |||||||||| || | Sbjct 707321 CTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAA 707380 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 ||| || |||||||||||| ||| | || ||||||||| || ||| ||||| | Sbjct 707381 AATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTT 707440 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || ||||| |||| |||||| || | || |||||||| || || | ||| || Sbjct 707441 GTCG--ATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTG 707498 Query 48713 ACAAAAATCTGCATC 48727 || || || |||||| Sbjct 707499 ACGAAGATTTGCATC 707513 Score = 107 bits (118), Expect = 2e-18 Identities = 142/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || ||||||||||| ||||| || |||| || | |||||||||| || | Sbjct 707549 CTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAA 707608 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 ||| || |||||||||||| ||| | || ||||||||| || ||| ||||| | Sbjct 707609 AATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTT 707668 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || ||||| |||| |||||| || | || |||||||| || || | ||| || Sbjct 707669 GTCG--ATGGTGTCGGAAGACTCGACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTG 707726 Query 48713 ACAAAAATCTGCATC 48727 || || || |||||| Sbjct 707727 ACGAAGATTTGCATC 707741 Score = 107 bits (118), Expect = 2e-18 Identities = 142/195 (73%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 48535 CTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTA 48594 |||||| || ||||||||||| ||||| || |||| || | |||||||||| || | Sbjct 707777 CTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAA 707836 Query 48595 AATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTCTGCTTGA--TA 48652 ||| || |||||||||||| ||| | || ||||||||| || ||| ||||| | Sbjct 707837 AATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTT 707896 Query 48653 GACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTC 48712 | || ||||| |||| |||||| || | || |||||||| || || | ||| || Sbjct 707897 GTCG--ATGGTGTCGGAAGACTCAACTTCCAACGTGATGGTTTTGCCAGTCAAAGTCTTG 707954 Query 48713 ACAAAAATCTGCATC 48727 || || || |||||| Sbjct 707955 ACGAAGATTTGCATC 707969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421251092186021