Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq21 706 0.0 >seq21 Length=72700 Score = 706 bits (782), Expect = 0.0 Identities = 695/895 (78%), Gaps = 2/895 (0%) Strand=Plus/Minus Query 135434 ATGATTCCTACTCTTCTCGCAGCTGCTATCTGCTTT-ATTGTTGCTTTCATCGCTGCACC 135492 ||||| ||||| | | ||||| || |||| || || || || |||||||| || || Sbjct 54006 ATGATCCCTACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCC 53948 Query 135493 TCCCGTCGATATTGACGGCATCCGCGAACCTGTTGCTGGTTCTCTAATGTACGGAAATAA 135552 ||| || || || || || || || || || || |||| || || ||||||||||| || Sbjct 53947 TCCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAA 53888 Query 135553 CATCATCTCTGGTGCTGTTATCCCTTCTAGCAACGCCATCGGCCTTCACTTCTATCCCAT 135612 |||||||||||||||||| | ||| | ||||| ||||| ||||||||||| || || Sbjct 53887 CATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAAT 53828 Query 135613 CTGGGAAGCTGCTTCTCTTGATGAGTGGCTATATAATGGTGGTCCTTATCAACTAGTGGT 135672 ||||||||| ||| | |||||||||||||| || || ||||| ||||| || || | || Sbjct 53827 CTGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGT 53768 Query 135673 CTTCCACTTCCTTATCGGTGTCTTCTCTTACATGGGTCGCGAGTGGGAACTCTCTTACCG 135732 | |||||| | ||||| || | || ||||||||||| |||||||| || || | ||| Sbjct 53767 ATGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCG 53708 Query 135733 ACTGGGTATGCGCCCTTGGATTTGTGTCGCTTACTCAGCCCCTGTTGCCGCTGCTACTGC 135792 | || ||||| |||||||| ||| |||||||| || ||||| || ||||| ||||| Sbjct 53707 TTTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGC 53648 Query 135793 TGTTTTCCTGGTCTACCCCTTTGGACAAGGTTCTTTCAGTGATGGTATGCCGCTTGGCAT 135852 || ||| | | ||||| | ||||| || |||||| ||| |||||||| ||||| || Sbjct 53647 AGTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTAT 53588 Query 135853 TTCTGGAACTTTTAACTACATGCTTGTTTTCCAGGCAGAACACAACATTCTCATGCATCC 135912 |||||||||||| |||| |||| | || |||||||| || |||||||| || ||||| || Sbjct 53587 TTCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCC 53528 Query 135913 TTTCCACATGTTGGGAGTTGCTGGGGTCTTCGGTGGTTCTCTGTTCTCTGCTATGCATGG 135972 ||||||||| | ||||| ||||| || ||||||||||| || |||||||||||||| || Sbjct 53527 ATTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGG 53468 Query 135973 ATCTCTTGTCACCTCTAGTCTTGTACGTGAGACGACTGAGGTAGAATCCCAGAACTATGG 136032 || || || || ||| ||| | ||||| || |||||| ||||| ||| || Sbjct 53467 TTCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGG 53408 Query 136033 TTACAAGTTCGGTCAAGAAGAAGAGACTTACAACATTGTTGCTGCTCATGGTTACTTCGG 136092 ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||| Sbjct 53407 ATACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGG 53348 Query 136093 TCGTCTGATCTTCCAATATGCGTCGTTCAACAACTCTCGTTCGCTACACTTTTTCCTTGC 136152 ||||| ||||||||||| || || ||||||||||| ||||| || ||||| ||||| || Sbjct 53347 ACGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGC 53288 Query 136153 TGCTTGGCCTGTTGTCGGTATCTGGTTTGCTGCCCTGGGCGTATCTACGATGGCGTTCAA 136212 | |||||||| | || |||||||| | || || || | ||||| ||||| ||||| Sbjct 53287 TATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAA 53228 Query 136213 CCTCAATGGATTCAACTTCAACCAGTCCATTGTATCTTCTGAAGGTCGTGTACTCAACAC 136272 ||| || |||||||||||||||||||| | ||| ||| | || ||||| ||||||| Sbjct 53227 CCTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACAC 53168 Query 136273 CTGGGCAGATGTGCTGAATCGTGCTGGTCTGGGTATGGAGGTGATGCACGAGCGT 136327 ||||| ||| | | || |||||| || |||||||| || |||||||||||| Sbjct 53167 ATGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGT 53113 Score = 623 bits (690), Expect = 1e-173 Identities = 756/1022 (74%), Gaps = 6/1022 (1%) Strand=Plus/Minus Query 137859 GGATGGTTCGATGTCTTGGATGACTGGATTAAACGAGATCGCTTTGTATTTGTGGGTTGG 137918 || |||||||| | | ||||||||| |||| || || || || ||||| || |||||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 137919 TCTGGACTACTACTTTTTCCCAC-TGCTTATTTGGCCCTTGGTGGCTGGCTTACTGGCAC 137977 |||||||| || || |||||| ||| || || || |||||||| ||||||||||| || Sbjct 62428 TCTGGACTTTTA-TTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 137978 AACGTTTGTTACAAGCTGGTACACCCACGGGTTGGCGTCTAGTTATCTTGAAGGCGCTAA 138037 ||| || || || |||||||| ||||| || || | || |||||||| ||| Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTGTAA 62310 Query 138038 TTTCCTCACAGCAGCTGTTTCGACTCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACT 138097 |||||||| |||| || || || || | | || |||| || || |||||||| || Sbjct 62309 CTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCT 62250 Query 138098 TTGGGGTCCTGAGTCTCAAGGAGATATCGTCCGCTGGTTCCAACTTGGGGGACTCTGGAC 138157 |||||| || || | ||||| || || || |||| |||||||| ||| | ||||| Sbjct 62249 TTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGAC 62190 Query 138158 TTTTGTGGCGCTCCACGGGGCCTTTAGTCTGATTGGATTCATGCTTCGCCAGTTTGAGAT 138217 || || || || ||||| || ||| | | || ||||| |||||||| || ||||| || Sbjct 62189 ATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAAT 62130 Query 138218 CTCTCGTCTGGTAGGCATCCGTCCCTACAACGCAATCGCATTCTCTGGTCCCATCGCTGT 138277 ||||| ||| || ||||| |||||||| || |||||||| | || || ||||| Sbjct 62129 TGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGT 62070 Query 138278 GTTCGTCAGCGTGTTCCTGATGTATCCTTTGGGTCAATCCAGTTGGTTCTTTGCTCCCTC 138337 ||| || || ||||| || || || | || ||||| ||||||||||||| || || Sbjct 62069 GTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATC 62010 Query 138338 CTTTGGTGTGGCAGCAATCTTCCGATTCCTGTTGTTCCTTCAGGGTTTCCATAACTGGAC 138397 |||||||| || | ||| ||||| || | | ||| | || |||||||| |||||||| Sbjct 62009 ATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGAC 61950 Query 138398 CCTCAACCCCTTTCATATGATGGGCGTAGCAGGTATTCTTGGTGGTGCTCTGCTCTGTGC 138457 || ||||| || || |||||||| ||||| ||| | || |||| || || || ||||| Sbjct 61949 ACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGC 61890 Query 138458 TATTCATGGTGCTACAGTAGAAAATACTTTGTATGAAGATGGCGAACAATCAAATACTTT 138517 ||||| || || || ||||| || || | | |||||||| || ||||| || || Sbjct 61889 AATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATT 61830 Query 138518 TAAAGCATTTGAACCTACTCAAGAAGAAGAAACCTATTCAATGGTTACTGCTAACCGTTA 138577 ||||| | || ||||||| |||||| || || |||||||| || |||||||||| Sbjct 61829 CCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTT 61770 Query 138578 CTGGTCGCAAATCTTTGGAATTGCTTTTAGTAATAAGCGTTGGCTTCACTTCTTTATGCT 138637 |||||| || || || || | ||||| || |||||||||||||||||||| ||||| Sbjct 61769 CTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCT 61710 Query 138638 CTTTGTTCCCGTCA-TGGGTCTCTGGACTAGTAGTA-TTGGTATTATTGGTCTTGCTCTT 138695 ||| || || || | ||||| | |||| | || | |||| | | || | || ||| Sbjct 61709 CTTCGTACCTGTTACTGGGT-TATGGA-TGTCAGCACTTGGAGTAGTAGGATTAGCACTT 61652 Query 138696 AACCTACGAGCGTATGATTTCGTATCGCAAGAAATTCGTGCAGCAGAAGATCCTGAATTC 138755 ||||| || || || || |||||||| ||||| || ||||| |||||||||||||| ||| Sbjct 61651 AACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTC 61592 Query 138756 GAGACCTTCTACACCAAGAACATTCTTCTGAATGAAGGTCTGCGTGCCTGGATGGCTCCT 138815 || || |||||||| |||||||||||||| || ||||| | ||||| |||||||| || Sbjct 61591 GAAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCT 61532 Query 138816 GTGGATCAACCTCACGAAAACTTTGTTTTTCCTGAAGAAGTATTGCCAAGAGGCAACGCT 138875 ||||| ||||| |||||| |||| || ||||| || ||| | ||| | || |||||| Sbjct 61531 CAAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCT 61472 Query 138876 CT 138877 || Sbjct 61471 CT 61470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627967835158400