Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq21 585 8e-163 >seq21 Length=72700 Score = 585 bits (648), Expect = 8e-163 Identities = 716/977 (73%), Gaps = 0/977 (0%) Strand=Plus/Minus Query 19290 TTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTT 19349 |||||| ||| |||| || |||||||| | || | || ||||| || ||| | Sbjct 54066 TTTTGTTCATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTA 54007 Query 19350 ATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCG 19409 ||||| ||| ||| || | |||||| || || || | || || |||||||| || Sbjct 54006 ATGATCCCTACATTATTAACAGCTACTTCTGTATTCATCGTAGCATTCATCGCAGCTCCT 53947 Query 19410 CCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAAT 19469 || || || || ||||| || ||||||||||| || || || | |||||||||||||| Sbjct 53946 CCAGTGGACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAAC 53887 Query 19470 ATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATC 19529 || || ||||| || |||||||| | || || || || ||||| ||||| || || ||| Sbjct 53886 ATCATCTCTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATC 53827 Query 19530 TGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTGTC 19589 |||||||| | || | ||||||||| | |||||||| || || || || ||| | || Sbjct 53826 TGGGAAGCAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTA 53767 Query 19590 TTCCACTTCTTAATAGGAGTAGCAGCATACGCTGGTAGACAGTGGGAACTATCTTACAGA 19649 | |||||||| || |||||| ||||| ||| | ||||||| || || | | | Sbjct 53766 TGTCACTTCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGT 53707 Query 19650 TTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCTTGCT 19709 ||||||||| | || ||||| ||||| || | || || || |||| || ||| Sbjct 53706 TTAGGAATGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCA 53647 Query 19710 GTGTTTCTCGTTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGGTATC 19769 || || || |||||||| | || || || ||| ||| ||||||||||||||||| Sbjct 53646 GTATTCATCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATT 53587 Query 19770 TCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCATCCG 19829 ||||| ||||| ||||| ||| |||||||||| || || ||||| ||||||||||| || Sbjct 53586 TCTGGAACTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCA 53527 Query 19830 TTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCACGGA 19889 ||||||||||| || || ||||| ||||||||||| || |||||||||||||||||||| Sbjct 53526 TTCCACATGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGT 53467 Query 19890 AGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTATGGC 19949 | || ||||| || | ||| ||||| |||||| | | ||| ||| || Sbjct 53466 TCACTCGTAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGA 53407 Query 19950 TATAAGTTCGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACACGGGTACTTTGGG 20009 || |||||||| ||||| |||||||| || || ||||| ||||| ||||| ||||| || Sbjct 53406 TACAAGTTCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGA 53347 Query 20010 AGATTGATATTTCAATATGCTTCTTTCAATAATTCTCGTTCTTTACATTTCTTTCTTGCT 20069 | | || || ||||| ||||| ||||| || || ||||| | || ||||| || ||| Sbjct 53346 CGTCTTATCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCT 53287 Query 20070 ACTTTCCCCGTGGTTGGCATATGGCTTACCTCCATGGGAATCTGCACTATGGCTTTCAAC 20129 | | || || | || || ||| | || | | || || | ||||||||||||||| Sbjct 53286 ATCTGGCCTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAAC 53227 Query 20130 CTTAATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGAAAGATAATCCCAACA 20189 ||||| || || ||||| ||||||||||| || ||| |||||| | ||| ||| Sbjct 53226 CTTAACGGATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACA 53167 Query 20190 TGGGCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCT 20249 ||||||||| | |||| | |||||||| || | ||||| ||||||||||| || ||| Sbjct 53166 TGGGCTGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCT 53107 Query 20250 CATAACTTCCCACTTGA 20266 || |||||||||||||| Sbjct 53106 CACAACTTCCCACTTGA 53090 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144441563979876