Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq21 753 0.0 >seq21 Length=72700 Score = 753 bits (834), Expect = 0.0 Identities = 711/900 (79%), Gaps = 10/900 (1%) Strand=Plus/Minus Query 211663 TTTATCGTAGCATTCATCGCAGCACCTCCCGTTGATATCGACGGAATCCGTGAACCAGTA 211722 || |||||||||||||||||||| ||||| || || ||||| || || ||||| |||||| Sbjct 53973 TTCATCGTAGCATTCATCGCAGCTCCTCCAGTGGACATCGATGGTATTCGTGAGCCAGTA 53914 Query 211723 GCTGGTTCATTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCATCTTCAAAC 211782 |||| ||| | ||||| || |||||||||||||||||||| || ||||| | |||||| Sbjct 53913 TCTGGATCACTTATGTACGGAAACAACATCATCTCTGGTGCTGTAGTTCCTACATCAAAC 53854 Query 211783 GCAATCGGTTTACACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTAC 211842 || ||||| | |||||||| || |||||||||||||| || |||||||||||||| ||| Sbjct 53853 GCTATCGGACTTCACTTCTACCCAATCTGGGAAGCAGCTACACTTGATGAGTGGCTTTAC 53794 Query 211843 AATGGTGGTCCTTACCAGTTGGTAATCTTCCACTTCCTTATCGGAATCTCAGCATACATG 211902 || ||||| ||||||||| | | | | |||||| | |||||| | | |||||||| Sbjct 53793 AACGGTGGACCTTACCAGCTTATCGTATGTCACTTCTTCATCGGAGTATGTTCATACATG 53734 Query 211903 GGAAGACAGTGGGAACTTTCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTAT 211962 || | ||||||| ||||||| ||||||||| ||||||||||||||| ||| ||||| Sbjct 53733 GGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAATGCGTCCTTGGATCGCTGTAGCTTAC 53674 Query 211963 TCAGCACCTGTATCAGCAGCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCA 212022 || || |||||| |||| || || |||||| | |||||||| |||| ||||| || Sbjct 53673 TCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCATCATTTACCCAATCGGACAGGGATCT 53614 Query 212023 TTCTCAGACGGTATGCCTTTAGGTATATCAGGAACATTCAACTTCATGTTCGTATTCCAA 212082 ||||| |||||||||||| | ||||| || ||||| |||||||||||| |||||||||| Sbjct 53613 TTCTCTGACGGTATGCCTCTTGGTATTTCTGGAACTTTCAACTTCATGATCGTATTCCAG 53554 Query 212083 GCAGAACATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGT 212142 || || || ||||||||||||||||||||||| ||| || || || ||| | |||||| Sbjct 53553 GCTGAGCACAACATCCTTATGCACCCATTCCACATGCTTGGAGTAGCTGGTGTATTCGGT 53494 Query 212143 GGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGTGAAACC 212202 || || | |||||||||||||||||||| || || || |||||||||||||||||||| Sbjct 53493 GGTTCACTTTTCTCTGCTATGCACGGTTCACTCGTAACTTCTTCACTTATCCGTGAAACT 53434 Query 212203 ACTGGTTTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACATATAAC 212262 |||| || ||| ||| || |||||||||||||||||||||||||| || ||| Sbjct 53433 ACTGAGAACGAATCAGCTAACGCAGGATACAAGTTCGGACAAGAAGAAGAGACTTACAAC 53374 Query 212263 ATCGTTGCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTCAACAAC 212322 || || ||||| || || |||||||| | ||||||||||| || || ||||||||||| Sbjct 53373 ATTGTAGCTGCTCACGGTTACTTCGGACGTCTTATCTTCCAATACGCTTCATTCAACAA- 53315 Query 212323 AGCAGAAGTT---TACACTTCTTCCTCGC-ATCATGGCCTGTTATCTGTGTATGGTTAAC 212378 | | ||| | |||||||||||||| ||| |||||||| || | | ||||| || Sbjct 53314 --CTCACGTTCACTCCACTTCTTCCTCGCTATC-TGGCCTGTAATGGGAATCTGGTTCAC 53258 Query 212379 CTCTATGGGTATCTGCACAATGGCATTCAACCTAAATGGATTCAACTTCAACCAATCAGT 212438 || | ||||| | || ||||| |||||||| || ||||||||||||||||| ||||| Sbjct 53257 AGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACGGATTCAACTTCAACCAGTCAGT 53198 Query 212439 TGTTGATGCATCAGGTAAGGTTGTTC-CTACTTGGGGTGATGTTCTTAACAGAGCAAACC 212497 || ||| || | | | | || || || |||| |||| || | ||| | || |||| Sbjct 53197 GGTAGATTCA-AACGGACGTGTGATCAACACATGGGCTGATATTGTAAACCGTGCTAACC 53139 Query 212498 TTGGTATGGAAGTTATGCACGAAAGAAATGCACACAACTTCCCACTTGACTTAGCATCTG 212557 ||||||||||||| |||||||| | || || |||||||||||||||||| | ||||||| Sbjct 53138 TTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCACTTGACCTCGCATCTG 53079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807554988016760