Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq1 154 2e-32 >seq1 Length=1352724 Score = 154 bits (170), Expect = 2e-32 Identities = 567/881 (64%), Gaps = 8/881 (1%) Strand=Plus/Plus Query 62970 TTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATG 63029 ||||| || || ||||||||||| || ||| ||| ||||||||||| | | ||| Sbjct 25617 TTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCACGCATCCTTGAACAACATG 25676 Query 63030 AATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTT 63088 | || |||||||||| | || | ||| | |||||| ||| | | || | || || Sbjct 25677 TACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAACCAAAGCTGCTGG-GCGTT 25735 Query 63089 TATTATAGATTTGTATC--TCCTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCG 63146 || | || || | | ||||| ||||||| || ||||| ||| ||||| Sbjct 25736 GATCGTC--TTCTTACCCTTGTTTTCTTTTTCGTACTTGGTGTACAAAGCTTCAAACTCT 25793 Query 63147 TCTCCCCAAACATT-GTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCC 63205 || ||||| |||| | ||| || || || || | ||| ||||| |||| ||||| || Sbjct 25794 TCACCCCAG-CATTCGGACAAACCCGGGCACTCGTTCGGGCACATTAACGTCCACTTGCC 25852 Query 63206 GTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCT 63265 || || | |||| |||||| || | ||| |||| | | | ||| | || | Sbjct 25853 GTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAACCGTAAAACAAGTCACG 25912 Query 63266 GGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGA 63325 | ||| ||| || || || |||||| | ||||| | | | || ||||| Sbjct 25913 AGCTCTCGCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGA 25972 Query 63326 ATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTAT 63385 ||||||||||| | ||| ||||| | | | || || || || || || || | Sbjct 25973 GTGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCAC 26032 Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445 ||| || || |||| || | || | | ||| ||||| |||||||| || |||| || Sbjct 26033 GTACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTTCGAGGTACCGTT 26092 Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCC 63505 || || || || | |||| || || | ||| || | ||| || || || Sbjct 26093 TGTGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGAATAGACAAACCAATACCGCC 26152 Query 63506 TGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATC 63565 || || || || | |||||| || |||||||| |||||||| || ||| || Sbjct 26153 GGCGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTC 26212 Query 63566 ATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAA 63625 || ||||| || | ||| || || | ||| | || || || || || || Sbjct 26213 TTCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGTCGCGGCGTACCGGCGTTGAA 26272 Query 63626 TAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGC 63685 ||||| || || ||||| || | ||| |||||| | | | ||||| |||| ||| Sbjct 26273 CAAGGTTGGCGACGCGTGGGTCATCCAACGTTCAGACAACATGTGATACGTATCAACAGC 26332 Query 63686 TGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745 || |||||| | || || || | | || | ||| ||||||||||| || | Sbjct 26333 CTTTTCGATATCCTTCTTGTGGATACCGATGGATACTCTCATCAACATGTGCTGCGGGCG 26392 Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805 || || | || || || ||||||||| || ||||||||||| |||||||| Sbjct 26393 CTCGACAACTTTACCGTCGATGCGCAACAAGTACGAGCGCTCCAAAGTTTTGAAACCAAA 26452 Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63846 |||| ||| |||||| || ||||| | ||| ||| || Sbjct 26453 GTAGTCGTAATCAAAGTCACGGTCGTAGACAATTTCCGCGT 26493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947036476360