Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1 210 6e-49 seq13 93.3 1e-13 >seq1 Length=1352724 Score = 210 bits (232), Expect = 6e-49 Identities = 585/887 (66%), Gaps = 18/887 (2%) Strand=Plus/Minus Query 363427 CGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGT 363486 || ||| | ||| | |||| || ||||||||||| ||||| ||| | || | || ||| Sbjct 26416 CGCATCGACGGTAAAGTTGTCGAGCGCCCGCAGCACATGTTGATGAGAGTATCCATCGGT 26357 Query 363487 ATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTA 363546 ||||| |||| | || || |||| || ||| | | | || ||| Sbjct 26356 ATCCACAAGAAGGATATCGAAAAGGCTGTTGATACGTATCACATGTTGTCTGAACGTTGG 26297 Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 | || ||||| ||||||| ||| ||| || || || | || || | || || Sbjct 26296 ATGACCCACGCGTCGCCAACCTTGTTCAACGCCGGTACGCCGCGACCGCAACTCTCCTCG 26237 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 |||||| | | |||||||| || ||||| || ||||||| ||||| | ||| | Sbjct 26236 TGCTTTTTGATTTGCATGAAGGAAGACTCCATTGAAGGTATCTACGACACGTTGAAGGAA 26177 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCA 363726 || || ||||||||| || ||||| |||||| | || || ||| | | || || Sbjct 26176 TGCGCGTGCATTTCCAAGTCCGCCGGCGGTATTGGTTTGTCTATTCACGACATCCGCGC- 26118 Query 363727 CAGAACAGT--TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTC 363784 || | || |||||| | |||||| || |||||| || | |||| ||||||| Sbjct 26117 CACTTC-GTCGTACATTAGAGGCACAAACGGTACCTCGAACGGTATCATTCCGATGCTTC 26059 Query 363785 GTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGT 363844 | ||||| || | || ||||||||||| ||||| || || || |||||||| || || | Sbjct 26058 GCGTGTTCAACGACACGGCGAGGTACGTGGACCAAGGCGGCGGTAAGCGCAAGGGCGCTT 25999 Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAA-A 363903 |||| || || ||||| || || | || || || || | || || | || || | Sbjct 25998 TTGCCATTTACCTCGAACCGTGGCACTCTGACATCTTCGACTGGCTCGACTTGCGAAAGA 25939 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 | |||||| || || ||| | | || ||||| |||| || | |||| | | || Sbjct 25938 ACCACGGG-AAGGAAGAAGCGAGAGCTCGTGACTTGTTTTA--CGGTTTGTG-GACGAAC 25883 Query 363964 CAT---TTTATGAAGCGCGTGGAGGCA---GGTAAGAATTGGTCACTCTTTTGCCCACAC 364017 || || ||||| | || || | | || ||| ||| | | | ||||| || Sbjct 25882 GATTTGTTCATGAAAAGAGTCGAAGAAAACGGCAAG---TGGACGTTAATGTGCCCGAAC 25826 Query 364018 GAATGTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTAT 364077 || || || ||| | ||||| |||||||| || | || ||| | ||| ||||| Sbjct 25825 GAGTGCCCGGGTTTGTCCGAATGCTGGGGTGAAGAGTTTGAAGCTTTGTACACCAAGTAC 25766 Query 364078 GAATCGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATG 364137 ||| || |||| | ||||| || ||| ||| |||| |||||||| || | Sbjct 25765 GAAAAAGAAAACAAGGGTAAGAAGACGATCAACGCCCAGCAGCTTTGGTTTGCGATTCTT 25706 Query 364138 GATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAG 364197 || |||| | || || || | || || ||||||| ||| ||| |||||||||||||| Sbjct 25705 GAAGCGCAAGTGGAAACTGGTAACCCGTACATGTTGTTCAAGGATGCGTGCAACCGCAAG 25646 Query 364198 TCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAA 364257 || ||||| || | | || || || | | |||| | || || ||||| | ||| Sbjct 25645 TCGAACCAACAAAATTTGGGCACGATCAAATCGTCCAACTTGTGCACAGAGATCGTCGAA 25586 Query 364258 TACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGC 364304 | |||| | || || || |||||||| |||||| | || || ||||| Sbjct 25585 TTCACCTCGCCGGAAGAAACTGCCGTTTGTAACTTGGCCTCCATCGC 25539 >seq13 Length=1091008 Score = 93.3 bits (102), Expect = 1e-13 Identities = 212/313 (68%), Gaps = 6/313 (2%) Strand=Plus/Plus Query 111604 AAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCAT 111663 |||| || ||||| |||| ||| |||||| || | | || ||||||||| || | Sbjct 667474 AAATCAAAAACAATCCAAACGATCGACGCATTCTTTTAACCGCGTGGAACCCAGCCGCGT 667533 Query 111664 TGGAAAAAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACGGGA 111723 || || ||||||| | || || ||||| | | || || || || || | ||| ||| Sbjct 667534 TGAAAGAAATGGCGTTGCCGCCGTGTCACATGTTCTGTCAATTCTACGT-CGCGAACGGA 667592 Query 111724 TGCTTTCA--TGCCAAATGTATCAGCGATC-TGCTGATATTGGTCTTGGTGTTCCGTTTA 111780 | || | ||||||||||| || || || ||| || || || | || || ||||| | Sbjct 667593 -GAGTTGAGTTGCCAAATGTACCAACGCTCGTGC-GACATGGGATTAGGCGTCCCGTTCA 667650 Query 111781 ATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGG 111840 | ||||| |||||| | | | || ||| | ||||| || | | || ||||||| Sbjct 667651 ACATTGCCAGTTACTCGTTGTTAACATGCATGATCGCGCAAGTCTGCGACCTGAAACCGG 667710 Query 111841 GTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTA 111900 | || || | ||||| |||| || ||||| || ||| | |||||| | || | | Sbjct 667711 GAGATTTTGTCCACGTGCTCGGCGACGCGCACGTGTACGCCAACCACGTCGAACCGTTGG 667770 Query 111901 AAACACAGTTGAA 111913 |||| || ||||| Sbjct 667771 AAACGCAATTGAA 667783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353249316422