Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq21 780 0.0 >seq21 Length=72700 Score = 780 bits (864), Expect = 0.0 Identities = 760/976 (78%), Gaps = 2/976 (0%) Strand=Plus/Minus Query 166062 ATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCC 166121 |||| | || || || | |||||| | || | || ||||| || | | ||||| || Sbjct 54058 ATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCC 53999 Query 166122 AACTCTGTTGGCAGCAACCATCTGT-TTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCG 166180 || | || |||| || ||||| |||||||| || ||| | || || ||||| || | Sbjct 53998 TACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGG 53940 Query 166181 ATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCT 166240 | |||||||| || |||||||| ||| | || || || ||||| || ||||||||||||| Sbjct 53939 ACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 53880 Query 166241 CTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAG 166300 |||||||||| || || | || ||||| || || ||||||||||| || |||||||||| Sbjct 53879 CTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 53820 Query 166301 CAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCAGCTCGTAGTCTTCCACT 166360 |||| |||||||||| |||||||| |||||||| |||| |||||| | || | |||| Sbjct 53819 CAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACT 53760 Query 166361 TCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATTGTCTTACCGCCTCGGTA 166420 || ||||||| | | | | |||||||||||||| ||||| | || | ||| | || | Sbjct 53759 TCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAA 53700 Query 166421 TGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTCC 166480 ||||||||||||| ||||| |||||||| ||||| ||||| ||| | ||||| ||| Sbjct 53699 TGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCA 53640 Query 166481 TGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCCTGGGTATCAGTGGCA 166540 | | || || |||| || || ||||||||||||| ||||| || ||||| ||| | Sbjct 53639 TCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAA 53580 Query 166541 CCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATA 166600 | ||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||| | Sbjct 53579 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 53520 Query 166601 TGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCG 166660 |||| || ||||| |||||||||||||| ||||||||||| || |||||||| |||| Sbjct 53519 TGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCG 53460 Query 166661 TTACTTCCTCGCTCGTCCGTGAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGT 166720 | ||||| || || ||||||| || ||||| | || || ||| || ||||||| Sbjct 53459 TAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGT 53400 Query 166721 TTGGTCAAGAAGAAGAGACCTACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGA 166780 | || |||||||||||||| |||||||| || |||||||| ||||||||||| || || | Sbjct 53399 TCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTA 53340 Query 166781 TCTTCCAATACGCTTCCTTCAACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGC 166840 |||||||||||||||| ||||||||||| || || || |||||||||||||| |||| Sbjct 53339 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGC 53280 Query 166841 CTGTTGTCGGTATCTGGTTTACTGCTCTTGGTGTTAGCACCATGGCATTCAACCTCAACG 166900 |||| | || |||||||| || ||||||||| || || ||||| |||||||| |||| Sbjct 53279 CTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACG 53220 Query 166901 GTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACTTGGGCAG 166960 | ||||||||||||||||| | | ||| | || |||||| ||||||| ||||| | Sbjct 53219 GATTCAACTTCAACCAGTCAGTGGTAGATTCAAACGGACGTGTGATCAACACATGGGCTG 53160 Query 166961 ATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCACAACT 167020 || | | ||||||||| || |||||||||||||||||||||||||| |||||||||| Sbjct 53159 ATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACT 53100 Query 167021 TCCCTCTGGATCTTGC 167036 |||| || || || || Sbjct 53099 TCCCACTTGACCTCGC 53084 Score = 596 bits (660), Expect = 2e-165 Identities = 748/1021 (73%), Gaps = 4/1021 (0%) Strand=Plus/Minus Query 167294 GGGTGGTTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGG 167353 || ||||| || | | |||||||||||||| || ||||| || || || || || ||| Sbjct 62488 GGTTGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGG 62429 Query 167354 TCTGGATTACTTCTTTTTCCCAC-TGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCAC 167412 |||||| | || || |||||| ||| || | ||| ||||||| ||||||||||| || Sbjct 62428 TCTGGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAAC 62370 Query 167413 GACGTTTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACCTTGA-GGGTGCTA 167471 || || || || ||||| || ||||| || || | |||||||| ||||| || Sbjct 62369 AACATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTG-TA 62311 Query 167472 ATTTTCTCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTAC 167531 | || ||||| ||||||| ||||| || | |||| |||| || || |||||||| | Sbjct 62310 ACTTCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCC 62251 Query 167532 TTTGGGGTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGG 167591 ||||||| || || | || || || |||| | ||||| || ||||| ||| | ||| Sbjct 62250 TTTGGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGA 62191 Query 167592 CTTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGA 167651 | || || || || |||||||| |||| | || |||||||||||||| |||||||| | Sbjct 62190 CATTCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAA 62131 Query 167652 TAAGTAGACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTG 167711 | | | |||| || ||||| ||||| |||||||| || || | || ||||||| Sbjct 62130 TTGCTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTG 62071 Query 167712 TCTTTGTGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGT 167771 | ||||| ||||| || || || || || || || || || |||||||||||||||| | Sbjct 62070 TGTTTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCAT 62011 Query 167772 CGTTTGGTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGA 167831 | |||||||| || | || || | || | || ||| | || |||||||| ||||||| Sbjct 62010 CATTTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGA 61951 Query 167832 CGCTCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTG 167891 | || ||||| ||||| ||||||||||| |||||| | || || | ||| | |||| || Sbjct 61950 CACTTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTG 61891 Query 167892 CAATCCATGGTGTTACAGTAGAGAATACTCTGTATGAAGATGGTGAGCAAGCAAACACTT 167951 |||| || || | || |||||||| || || | ||||||||||| ||||||| | Sbjct 61890 CAATTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACAT 61831 Query 167952 TCAAAGCATTTGATACGACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGAT 168011 || ||||| | | ||||| | ||| || ||||| || ||||| || |||||||| | Sbjct 61830 TCCGTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTT 61771 Query 168012 TCTGGTCTCAAATTTTTGGTATTGCTTTCAGCAATAAGCGTTGGTTGCACTTCTTTATGC 168071 ||||||| || ||||| ||| | |||||| || ||||||||| | |||||||| |||| Sbjct 61770 TCTGGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGC 61711 Query 168072 TTTTCGTTCCTGTCATGGGACTTTGGACAAGTTCTATTGGTATCATCGGTCTCGCACTTA 168131 | ||||| ||||| | || | |||| | |||| | | || | ||||||| Sbjct 61710 TCTTCGTACCTGTTACTGGGTTATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTA 61651 Query 168132 ATCTTCGTGCTTATGACTTTGTGTCTCAGGAAGTTAGAGCAGCAGAGGATCCAGAGTTTG 168191 | || ||||| || ||||| || || || || | | || ||||| ||||| ||||| | Sbjct 61650 ACCTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCG 61591 Query 168192 AAACTTTCTATACGAAAAACATCCTCCTCAATGAAGGACTCCGTGCCTGGATGGCTCCAG 168251 |||| ||||| ||||| ||||| || || || |||||| ||||||| |||||||| | Sbjct 61590 AAACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTC 61531 Query 168252 TAGACCAACCACATGAAAACTTTGTATTCCCAGAAGAAGTATTGCCAAGAGGCAACGCTC 168311 ||| || || ||||||||| |||||||||| || || ||| | ||| | || ||||||| Sbjct 61530 AAGATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTC 61471 Query 168312 T 168312 | Sbjct 61470 T 61470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 567231851101600