Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq14 89.7 6e-13 seq16 87.8 2e-12 >seq14 Length=1037991 Score = 89.7 bits (98), Expect = 6e-13 Identities = 125/173 (72%), Gaps = 2/173 (1%) Strand=Plus/Plus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 |||| | ||||||||||| || | || ||||||||||||| || |||||||| ||| Sbjct 66173 TGTAAAGCAAGCACGCAAAATCTCTGTGCAAACCTTCGTCTCTGGAGATCAACTCGTTGG 66232 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA-AAACTA 93199 ||| || | || || | || |||| ||||||||||| | |||| |||| ||| Sbjct 66233 AGAAGGTGAGCCCCGGCATCATGCCTCTCTTCTTGAGCCAGTAGATTG-AGCAGAAAGAG 66291 Query 93200 CCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 || || || || || ||||| ||| || || || || | ||||||||| || Sbjct 66292 CCGGAGAAGAAGATGCCTTCGACGCAGGCGAACGCGACCAAACGTTCGGCGAA 66344 >seq16 Length=955652 Score = 87.8 bits (96), Expect = 2e-12 Identities = 350/533 (66%), Gaps = 20/533 (4%) Strand=Plus/Minus Query 92782 TTCTTATTCATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTC 92841 || |||||||| || || ||||||||| | | || | ||| || || || | | Sbjct 698341 TTGTTATTCATGACTCCTGCTTTTTGGTACTGATCGACGCGATGTTCGAAAAAGTTCGCC 698282 Query 92842 TTTCCTTCCAAAGATATCGAATTCA--CTAGTGATTGGATTCTTGGCGTTATAATACTTT 92899 || |||| ||| || |||| | || | | || ||||||| |||||||||||||| Sbjct 698281 TTGCCTTGCAACGAAATCGTCTCCATCCAATCGAACGGATTCTGCGCGTTATAATACTTA 698222 Query 92900 TCACCGATCAACTCGTACAAT-AATCTATCAGCTACAAATTCTATGTACTGAGACATCAA 92958 || ||||| | || | || | ||| || ||||| || | ||| | ||||| || Sbjct 698221 CTCGCGCCCAACT-GCACGAGCAAACGATCGGCGACAAACTCGACGTAATCTGACATTAA 698163 Query 92959 ATCACAATTCATTCCTAGAAGACGTACAGGTAGA-GCGTCGGTCAAGAAATCTTTCTCGA 93017 ||| |||||| || | | ||| ||| | | |||||| | ||| ||||| |||| Sbjct 698162 ATCTGCATTCATGCCGACTA-ACGCGCAGCTCAACGCGTCGCAGACGAATTCTTTTTCGA 698104 Query 93018 TTACAACGGCTTCTTTCAAGATT-TCTATTACT-CTACTATTTGGTG-GTTTTTG-TACG 93073 || | || || | | ||| ||| | | || || | | || | || || | | Sbjct 698103 TTGCGACTGCGT---TGGAGACAATCTCGTGCAGCTCCTCCTCGCTGAGCTTGTGCTTCA 698047 Query 93074 ACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAAC 93133 || | |||| ||| || || ||| || || ||||||||||| |||||| Sbjct 698046 AC-TCGGAATACAGCTCGCAGGCGAAATCGCAGTGCAACCCTTCGTCTCGACTGATCAAC 697988 Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 || ||| || || |||||| | || ||||| ||||| |||||||| || | ||| Sbjct 697987 TCGTTGGAAAACGTCAAACCTTTCATCAATCCTCTCTTCTTTAGCCAAAAGATGGC-GCA 697929 Query 93194 -AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252 ||||| || || || || ||||||||| ||| || | || | |||||||||||| Sbjct 697928 GAAACTGCCGCTGAAGAAAATGCCTTCCACGCATGCGAAACCGACTAAACGTTCGGCAAA 697869 Query 93253 ATTTGCGGA--ATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTT 93303 | || || | ||| ||||||||| | |||||||| || || || || Sbjct 697868 CCTCGCCGACGAAGACT--CGATCCATTTCATCGCCCAATCCGCCTTCTTTTT 697818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860653824040