Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq7 107 2e-18 seq16 95.1 1e-14 seq12 89.7 4e-13 seq17 87.8 2e-12 >seq7 Length=519835 Score = 107 bits (118), Expect = 2e-18 Identities = 146/203 (72%), Gaps = 2/203 (1%) Strand=Plus/Plus Query 114171 AAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCT 114230 || || || |||| ||| || |||||||||||||| ||||| || ||| || ||| Sbjct 260374 AACACCAAGTGTAACGTGGACTCTTTTTGAATGTTATAATCCGCCAAAGTGCGTCCGTCT 260433 Query 114231 TCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCG 114290 || | ||||| || ||| |||| | ||||| ||||| ||||| |||||||| ||||| Sbjct 260434 TCTAACTGTTTCCCGGCGAAGATCAACCGCTGCTGGTCAGGAGGGATGCCTTCCTTGTCT 260493 Query 114291 GCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTT 114350 || || || | | || | |||||| | |||||| || |||| ||| | |||| Sbjct 260494 TGGATTTTCGCCTTGACGTTGTCGATGGTGTCCGAGGATTCCACTTCCAAGGTGATCGTT 260553 Query 114351 TTGCCGGTCAGAGTTTTTACAAA 114373 ||||| ||| | |||||| ||| Sbjct 260554 TTGCCCGTC--ACTTTTTATAAA 260574 >seq16 Length=955652 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| |||| | ||| || || || | |||||| || || || |||||||||||| | Sbjct 707286 CCGCCTCGTAAACGCAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCC 707345 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || | ||||| | || ||||| ||| | || | ||||| || ||||| || Sbjct 707346 AACGTTCTGCCGTCTTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGG 707405 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||| ||||| ||||| || | | || | |||||||| || ||||| Sbjct 707406 ATACCTTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACT 707465 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | |||||||| |||| ||| || || || || ||||| Sbjct 707466 TCCAACGTGATGGTTTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707512 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| || || || | |||||| || || || |||||||||||| || || | || Sbjct 707528 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTC 707587 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 ||| | || ||||| ||| | || | ||||| || ||||| || || ||||| ||||| Sbjct 707588 TTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTC 707647 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 ||||| || | | || | |||||||| || ||||| |||| || | || Sbjct 707648 TTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACTTCCAACGTGATGGT 707707 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||| |||| ||| || || || || ||||| Sbjct 707708 TTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707740 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 114170 CAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATC 114229 ||| || || || | |||||| || || || |||||||||||| || || | || Sbjct 707756 CAACACCAAGTGCAACGTAGACTCCTTCTGGATGTTGTAATCGGCCAACGTTCTGCCGTC 707815 Query 114230 TTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTC 114289 ||| | || ||||| ||| | || | ||||| || ||||| || || ||||| ||||| Sbjct 707816 TTCTAACTGCTTACCGGCGAAAATCAATCGCTGCTGATCCGGCGGGATACCTTCCTTGTC 707875 Query 114290 GGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 ||||| || | | || | |||||||| || || || |||| || | || Sbjct 707876 TTGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACTTCCAACGTGATGGT 707935 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||| |||| ||| || || || || ||||| Sbjct 707936 TTTGCCAGTCAAAGTCTTGACGAAGATTTGCAT 707968 >seq12 Length=1122692 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| || | | ||| || || || | || ||||||||||| ||||||||||| Sbjct 916942 CCGCCTCGCAAACGCAACACCAAGTGCAAGGTTGATTCTTTTTGGATGTTGTAATCCGCG 917001 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| | ||||| | |||||||| ||| | || | ||||| |||||||| ||| Sbjct 917002 AGAGTTCTCCCGTCTTCTAACTGTTTACCGGCGAAAATCAATCGCTGCTGGTCCGGCGGA 917061 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| ||| || ||| | | || | ||||| | ||| ||||| Sbjct 917062 ATGCCCTCCTTGTCTTGAATTTTCGCTTTCACGTTGTCGATCGTGTCCGAGGACTCGACT 917121 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTT 114367 || | || | ||||| || |||| |||||| Sbjct 917122 TCGAGCGTGATGGTTTTCCCAGTCAAAGTTTT 917153 >seq17 Length=937610 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || ||||| || | | ||| || || || | || ||||||||||||||||| || ||| Sbjct 351322 ATGCCGCCGCGCAAACGCAAGACCAAGTGCAAGGTGGATTCTTTTTGAATGTTATAGTCG 351381 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| || |||||| | |||||| || ||| |||| | ||||| || ||||| Sbjct 351382 GCTAAAGTTCGGCCATCTTCTAATTGTTTTCCGGCGAAGATCAATCGCTGCTGATCCGGC 351441 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| |||||||| || || || | | || | ||||| | || ||| Sbjct 351442 GGGATGCCCTCTTTGTCTTGGATTTTCGCCTTGACGTTGTCGATAGTGTCCGAAGACTCG 351501 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAA 114375 || || | ||| | ||| ||||| || || || |||| ||| Sbjct 351502 ACTTCGAGGGTGATCGTCTTGCCCGTGAGCTGTTATACATAAA 351544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134292471852