Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1 143 3e-29 seq14 100 3e-16 seq12 96.9 4e-15 >seq1 Length=1352724 Score = 143 bits (158), Expect = 3e-29 Identities = 547/851 (64%), Gaps = 17/851 (2%) Strand=Plus/Plus Query 114470 GCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCC 114529 ||||| || |||| ||||| || | || || ||| ||| | || | || || Sbjct 25539 GCGATGGAGGCCAAGTTACAAACGGCAGTTTCTTCCGGCGAGGTGAATTCGACGATCTCT 25598 Query 114530 GTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACAC 114589 || ||||| || || || || |||||||| || | ||| || ||||| ||| ||| Sbjct 25599 GTGCACAAGTTGGACGATTTGATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCAC 25658 Query 114590 GCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTC 114649 ||||||||| | | |||||| || | || || ||| ||| | | ||||| || | Sbjct 25659 GCATCCTTGAACAACATGTACGGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAAC 25718 Query 114650 CAGACATCGGCGGCTGGCACAGTGG-CGTTGGCTCGCCCCT-----CCTCCTCGTACTTT 114703 || | || ||||| | || ||| || ||| | | | |||||||| Sbjct 25719 CAAA-----GCTGCTGGG-CGTTGATCGTCTTCTTACCCTTGTTTTCTTTTTCGTACTTG 25772 Query 114704 GTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGG 114763 ||||| | |||||||||||||||||| | || || | || || || | ||| Sbjct 25773 GTGTACAAAGCTTCAAACTCTTCACCCCAGCATTCGGACAAACCCGGGCACTCGTTCGGG 25832 Query 114764 CAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAG 114823 || | | | ||| | || || || || | |||||||| | || |||| Sbjct 25833 CACATTAACGTCCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCAC 25892 Query 114824 AGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 114883 | | | | || | || ||| | |||||||| | ||| || || ||||| || Sbjct 25893 AAACCGTAAAACAAGTCACGAGCTCTCGCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCG 25952 Query 114884 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA 114943 | |||| | ||| || | |||||||||||| ||||| | || | | ||||| || Sbjct 25953 AGCCAGTCGAAGATGTCAGAGTGCCACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGC 26012 Query 114944 CGACCA--GCCT-GGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATG 115000 ||| |||| ||| || |||||||| ||| | || || ||||||||||| |||||| Sbjct 26013 TTACCGCCGCCTTGGTCCACGTACCTCGCCGTGTCGTTGAACACGCGAAGCATCGGAATG 26072 Query 115001 ATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTATTGGCTCTGACATCATGG 115060 ||||| | || || ||||| || | ||| ||| | |||| | || || || Sbjct 26073 ATACCGTTCGAGGTACCGTTTGTGCCTCTAATGTACGACGAAGTGGCGCGGATGTCGTGA 26132 Query 115061 ATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCG 115120 || || ||||||||| || || |||| || || |||||| ||| | | || || Sbjct 26133 ATAGACAAACCAATACCGCCGGCGGACTTGGAAATGCACGCGCATTCCTTCAACGTGTCG 26192 Query 115121 TAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGC 115180 ||||| || || || ||||| |||| | || | ||||| || | ||| || Sbjct 26193 TAGATACCTTCAATGGAGTCTTCCTTCATGCAAATCAAAAAGCACGAGGAGAGTTGCGGT 26252 Query 115181 CTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATC 115240 | || ||||| |||||||| | |||||| | ||||||| | | | || || |||| | Sbjct 26253 CGCGGCGTACCGGCGTTGAACAAGGTTGGCGACGCGTGGGTCATCCAACGTTCAGACAAC 26312 Query 115241 TTATCGTAGGTCTCCA-AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | | || || || | || | | || || | | ||| |||||||| || || | Sbjct 26313 ATGTGATACGTATCAACAGCCTTTTCG-ATATCCTTCTTGTGGATACCGATGGATACTCT 26371 Query 115300 CATAAACATGT 115310 ||| ||||||| Sbjct 26372 CATCAACATGT 26382 >seq14 Length=1037991 Score = 100 bits (110), Expect = 3e-16 Identities = 299/454 (66%), Gaps = 8/454 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTC--TCC 125815 ||| || || || || ||||| |||||||| ||||| || | ||| || ||| ||| Sbjct 65898 GTACTCGCCGACACGTTTCTCAAAGAAGTTCGTCTTGCCTTGCAAA--GAAATTAATTCC 65955 Query 125816 ATAAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGCACC-CCAATCTGTTTGAGGAG 125874 || | || || |||||| | || | | | || ||| || | ||| ||| | Sbjct 65956 ATCCAGTCGAACGGGTTCGCGGTGT-CGTACTCCTTCGCAAAGCCGAGCTGCGAGAGCAA 66014 Query 125875 ACGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTT 125934 |||| | |||||||| ||||| || |||| | || | |||||| |||| ||| Sbjct 66015 GTGATCGGCAACGTACTCGATGTAATCTCTCATCATGTCGGCGTTCATGCCGACGAGCGC 66074 Query 125935 ACATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGC 125994 || || | |||||| | | ||| ||||||||||||| || || || || || Sbjct 66075 GCACGGCAACGCGTCGCACACAAACTCCTTCTCAATTTCAACCGCCTCGGTAACAATCTT 66134 Query 125995 GTGAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAACT 126053 | | ||| | || || | ||| ||| || || | || |||| |||| | Sbjct 66135 TCTCAACTTCTCCTCGCCCGGCGTGTTGTTCAACATCGTGTAAAGCAAGCACG-CAAAAT 66193 Query 126054 CTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGA 126113 || ||| | ||| ||||| | |||||| | || || |||||| || || ||||| | Sbjct 66194 CTCTGTGCAAACCTTCGTCTCTGGAGATCAACTCGTTGGAGAAGGTGAGCCCCGGCATCA 66253 Query 126114 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCA 126173 || | |||||| | |||| | || | || || || || ||||||||||| || || | Sbjct 66254 TGCCTCTCTTCTTGAGCCAGTAGATTGAGCAGAAAGAGCCGGAGAAGAAGATGCCTTCGA 66313 Query 126174 CACACGCGAACGCAAAGAGACGCTCAGCAAAGGA 126207 | || |||||||| | | ||| || || ||||| Sbjct 66314 CGCAGGCGAACGCGACCAAACGTTCGGCGAAGGA 66347 >seq12 Length=1122692 Score = 96.9 bits (106), Expect = 4e-15 Identities = 264/395 (67%), Gaps = 22/395 (6%) Strand=Plus/Plus Query 172621 ACCCTTAATGTGTGAACCATCGTTATCCGCATCCGTCATAATCATAAGCCGACCATAGCG 172680 ||| || ||||| |||||||||| ||| ||||||||| ||||| | | || || || Sbjct 1064868 ACCTTTGATGTGCGAACCATCGTGATCTTGATCCGTCATGATCATCAACTTCCCGTATCG 1064927 Query 172681 AAGC-TC-----GGAAACATCTTGATACTCCTTACCCTGTTGAAGACCCAAGATCTTCTT 172734 | | || |||| | || | ||| || || ||||| | ||||| |||| || Sbjct 1064928 CAACGTCTTGATGGAATCTTCGTCGTACGTTTTGCCGTGTTGCAAGCCCAAAATCTGTTT 1064987 Query 172735 GAGATCATTGAACTC----TTGGTTTGATGTGAGTTGCGCCACTGAAGCATCGCGGACAT 172790 || | ||| || ||| | | | | ||| | | ||||| ||||| || | Sbjct 1064988 GATGTGGGTGATTTCCACATTGTTCT----TTACTTGATCAAACGAAGCGTCGCGAACGT 1065043 Query 172791 TTTTACACTTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGAC 172850 | ||||||| | | || ||||| ||||||| || | || || | || | || Sbjct 1065044 TCAATAACTTCCCTCTCAACGGAAACACCCCGTAGTTGTCTCTTCCGACGATGGACAAAC 1065103 Query 172851 CAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACA--CTTTCC 172908 | | ||| || | | || || ||||| ||||| || | || ||||| || ||||| Sbjct 1065104 CGGAAACCGCCAACGCTTTGGCAGAATCCCCCTCGGTTAAAATCAGCGTGCAGTCTTTCG 1065163 Query 172909 AGATTGTG-CCGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGG 172967 || ||| | ||| || || |||||||||||||||||||| ||||||||||| | | | Sbjct 1065164 AG-TTGCGTCCG--CCGGCGTTGTTCGCATCGTCCAACTTCGGAATACCAGTCA-ATCGC 1065219 Query 172968 ACTTGC-GGGCACCATCTGTCTTCTTGAGTTCCTT 173001 | | || | ||||||| |||||||| | ||||| Sbjct 1065220 AATCGCTTGACACCATCGGTCTTCTTCAAGTCCTT 1065254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353443194680