Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq1 178 1e-39 >seq1 Length=1352724 Score = 178 bits (196), Expect = 1e-39 Identities = 484/741 (65%), Gaps = 0/741 (0%) Strand=Plus/Minus Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACG 93957 || ||| |||||||||| || || ||| || || | || ||||| || |||| Sbjct 26281 CCAACCTTGTTCAACGCCGGTACGCCGCGACCGCAACTCTCCTCGTGCTTTTTGATTTGC 26222 Query 93958 AACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCA 94017 | |||| |||||||| || || | ||||| | ||||| || ||| ||| || Sbjct 26221 ATGAAGGAAGACTCCATTGAAGGTATCTACGACACGTTGAAGGAATGCGCGTGCATTTCC 26162 Query 94018 AAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATC 94077 || | ||| || || || || | | | |||||| | || |||| || ||||| Sbjct 26161 AAGTCCGCCGGCGGTATTGGTTTGTCTATTCACGACATCCGCGCCACTTCGTCGTACATT 26102 Query 94078 CGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCG 94137 | || || || || ||||| ||||| || | || ||||| || || |||||| || || Sbjct 26101 AGAGGCACAAACGGTACCTCGAACGGTATCATTCCGATGCTTCGCGTGTTCAACGACACG 26042 Query 94138 GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAG 94197 ||| | ||||||||||| || || || | | | ||||| |||| || | || ||||| Sbjct 26041 GCGAGGTACGTGGACCAAGGCGGCGGTAAGCGCAAGGGCGCTTTTGCCATTTACCTCGAA 25982 Query 94198 CCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTG 94257 || |||||| | ||| | | | ||||| |||||||||||||||| || || Sbjct 25981 CCGTGGCACTCTGACATCTTCGACTGGCTCGACTTGCGAAAGAACCACGGGAAGGAAGAA 25922 Query 94258 GAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTC 94317 | ||| || | ||| | || |||| | | ||| | || | || |||||| | ||| Sbjct 25921 GCGAGAGCTCGTGACTTGTTTTACGGTTTGTGGACGAACGATTTGTTCATGAAAAGAGTC 25862 Query 94318 GAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGACGTT 94377 || ||||| | |||| | | || || || || || || || ||||||| Sbjct 25861 GAAGAAAACGGCAAGTGGACGTTAATGTGCCCGAACGAGTGCCCGGGTTTGTCCGAATGC 25802 Query 94378 TGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCAGGAAG 94437 || || ||||||| ||||| | |||||| | ||||| | |||| Sbjct 25801 TGGGGTGAAGAGTTTGAAGCTTTGTACACCAAGTACGAAAAAGAAAACAAGGGTAAGAAG 25742 Query 94438 GTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACG 94497 || | || | |||| ||| | ||| | || | || ||||| || |||| Sbjct 25741 ACGATCAACGCCCAGCAGCTTTGGTTTGCGATTCTTGAAGCGCAAGTGGAAACTGGTAAC 25682 Query 94498 CCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTG 94557 || ||||| ||||||||||| | |||| |||||| ||||| || | | || | Sbjct 25681 CCGTACATGTTGTTCAAGGATGCGTGCAACCGCAAGTCGAACCAACAAAATTTGGGCACG 25622 Query 94558 ATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCT 94617 ||||| || || ||||||| ||||| ||||| | || || ||||| || | ||| Sbjct 25621 ATCAAATCGTCCAACTTGTGCACAGAGATCGTCGAATTCACCTCGCCGGAAGAAACTGCC 25562 Query 94618 GTGTGTAACCTGGGCTCCATC 94638 || |||||| ||| ||||||| Sbjct 25561 GTTTGTAACTTGGCCTCCATC 25541 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494723070135160