Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_013085.1 Length=194454 Score E Sequences producing significant alignments: (Bits) Value seq21 839 0.0 >seq21 Length=72700 Score = 839 bits (930), Expect = 0.0 Identities = 786/995 (79%), Gaps = 6/995 (1%) Strand=Plus/Plus Query 7538 GCAAGGTCAAGAGGGAAGTTGTGAGCATTACGCTCGTGCATGACTTCCATGCCAAGACCA 7597 || |||||||| |||||||||||||| |||||||||||||| |||||||| ||||| | Sbjct 53084 GCGAGGTCAAGTGGGAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCAAGGTTA 53143 Query 7598 GCACGGTTGAGCACGTCTGCCCAGGTGTTCAGGACACGACC--TTGACCATCAATGATGG 7655 |||||||| | | || ||||| ||||| | ||||| || |||| ||| | | | Sbjct 53144 GCACGGTTTACAATATCAGCCCATGTGTTGATCACACGTCCGTTTGA--ATCTACCACTG 53201 Query 7656 ACTGGTTGAAGTTGAAACCGTTGAGGTTGAATGCCATGGTGCTAACACCAAGAGCAGTGA 7715 |||||||||||||||| ||||| |||||||| ||||| || || ||||||||| |||| Sbjct 53202 ACTGGTTGAAGTTGAATCCGTTAAGGTTGAAAGCCATAGTAGAAATACCAAGAGCTGTGA 53261 Query 7716 ACCAGATGCCAACAACTGGCCATGCTGCGAGGAAGAAGTGCAGCGAACGGGAGTTGTTGA 7775 ||||||| || | || ||||| |||||||||||||| || ||||| |||||||||| Sbjct 53262 ACCAGATTCCCATTACAGGCCAGATAGCGAGGAAGAAGTGGAGTGAACGTGAGTTGTTGA 53321 Query 7776 ACGAAGCGTATTGGAAGATCAGACGACCAAAGTATCCGTGAGCAGCAACGATGTTGTAGG 7835 | ||||||||||||||||| ||||| || ||||| ||||||||||| || |||||||| | Sbjct 53322 ATGAAGCGTATTGGAAGATAAGACGTCCGAAGTAACCGTGAGCAGCTACAATGTTGTAAG 53381 Query 7836 TCTCTTCTTCTTGACCGAACTTATAACCATAGTTCTGGGACTCAGACTCAGTGGTTTCAC 7895 ||||||||||||| |||||||| || || ||| || || |||||| ||||||| Sbjct 53382 TCTCTTCTTCTTGTCCGAACTTGTATCCTGCGTTAGCTGATTCGTTCTCAGTAGTTTCAC 53441 Query 7896 GAACCAGAGAAGAGGTTACAAGCGAACCATGCATCGCACTGAACAGAGAACCACCAAAGA 7955 | | || ||||| ||||| || ||||| ||||| ||| ||| || |||||||| || | Sbjct 53442 GGATAAGTGAAGAAGTTACGAGTGAACCGTGCATAGCAGAGAAAAGTGAACCACCGAATA 53501 Query 7956 CACCAGCGACGCCCAGCATGTGGAAGGGGTGCATCAGGATGTTGTGCTCTGCTTGGAAGA 8015 ||||||| || || ||||||||||| |||||||| |||||||||||||| || ||||| | Sbjct 53502 CACCAGCTACTCCAAGCATGTGGAATGGGTGCATAAGGATGTTGTGCTCAGCCTGGAATA 53561 Query 8016 CAAGCATGTAGTTGAACGTACCAGAGATGCCAAGAGGCATAGCGTCAGAGAAAGAACCTT 8075 | | |||| ||||||| || ||||| || |||||||||||| ||||||||||||| || | Sbjct 53562 CGATCATGAAGTTGAAAGTTCCAGAAATACCAAGAGGCATACCGTCAGAGAAAGATCCCT 53621 Query 8076 GACCGAAAGGATAGACGAGGAATACAGCAGATGCTGCAGCAACTGGAGCAGAGTATGCTA 8135 | |||| || || | || |||||| |||| ||| || || || ||||||||||| |||| Sbjct 53622 GTCCGATTGGGTAAATGATGAATACTGCAGTTGCAGCTGCTACAGGAGCAGAGTAAGCTA 53681 Query 8136 CACAGATCCAGGGACGCATACCTAGACGGTAAGAAAGTTCCCACTCACGACCCATGTATG 8195 || |||||| |||||||| |||| |||| | ||||| |||||||||||||||||||||| Sbjct 53682 CAGCGATCCAAGGACGCATTCCTAAACGGAATGAAAGCTCCCACTCACGACCCATGTATG 53741 Query 8196 CATAGATACCGATCAGGAAGTGGAAGATAACGAGTTGGAAAGGACCACCGTTGTAGAGCC 8255 | | | ||||| | |||||| | | | || ||| |||| ||||||||||| |||| Sbjct 53742 AACATACTCCGATGAAGAAGTGACATACGATAAGCTGGTAAGGTCCACCGTTGTAAAGCC 53801 Query 8256 ACTCATCAAGAGAAGCTGCTTCCCAGATGGGATAGAAGTGGAGACCAATAGCGTTAGAAG 8315 |||||||||| | ||||||||||||||| || |||||||| || || |||||||| || | Sbjct 53802 ACTCATCAAGTGTAGCTGCTTCCCAGATTGGGTAGAAGTGAAGTCCGATAGCGTTTGATG 53861 Query 8316 AAGGAACAACAGCACCAGAGATGATGTTGTTGCCATACATGAGCGAACCAGCGACGGGTT 8375 |||||| ||||||||||||||||||||||| || ||||| || || |||| || || | Sbjct 53862 TAGGAACTACAGCACCAGAGATGATGTTGTTTCCGTACATAAGTGATCCAGATACTGGCT 53921 Query 8376 CACGGATGCCGTCAATGTCCACAGGAGGAGCAGCGACGAAAGCGACGATGAA-ACAAATA 8434 |||| || || || |||||||| |||||||| |||| ||| || |||||||| ||| | | Sbjct 53922 CACGAATACCATCGATGTCCACTGGAGGAGCTGCGATGAATGCTACGATGAATACAGA-A 53980 Query 8435 GCAGCAGCGAGCAGCGTAGGAATCATCAGGACACCGAACCAACCGACATACAGACGATTG 8494 | ||| | | | ||||| ||||| | ||||||||||| |||| || | ||| || Sbjct 53981 GTAGCTGTTAATAATGTAGGGATCATTAATACACCGAACCATCCGATGTATAAACGGTTC 54040 Query 8495 TTGGTGGAGGTTACCCAGTTACAGAATTGTTCCCA 8529 | || || || | ||| ||| || || |||| Sbjct 54041 TCAGTTGAAGTGATCCATGAACAAAAACGTCCCCA 54075 Score = 636 bits (704), Expect = 2e-177 Identities = 746/1003 (74%), Gaps = 4/1003 (0%) Strand=Plus/Plus Query 6263 AGAGCGTTGCCTCTTGGCAATACTTCTTCAGGAAATACAAAGTTTTCATGTGGTTGATCC 6322 |||||||| || | ||| | ||| || ||||| ||||||| ||||||||| || ||||| Sbjct 61470 AGAGCGTTTCCACGTGGAAGTACCTCCTCAGGGAATACAAGGTTTTCATGAGGCTGATCT 61529 Query 6323 ACTGGTGCCATCCAGGCACGTAGACCTTCATTCAATAGGATGTTCTTGGTATAGAACGTC 6382 | ||||||||| ||||| | ||||| || | || |||||||| || ||||| || Sbjct 61530 TGAGCTGCCATCCATGCACGGATTCCTTCGTTAAGAAGAATGTTCTTCGTGTAGAATGTT 61589 Query 6383 TCGAACTCTGGATCCTCCGCTGCTCTGATCTCTTGTGAAACAAAGTCATAAGCTCTAAGG 6442 |||||||| ||||| || || || | |||||||||||| || ||||| || || | ||| Sbjct 61590 TCGAACTCAGGATCTTCTGCAGCACGGATCTCTTGTGATACGAAGTCGTATGCACGGAGG 61649 Query 6443 TTAAGTGCAAGACCAATAATACCAA-TGCTAGAGGTCCAAAGACCCA-TAACAGGAACAA 6500 |||||||| | || | | |||| |||| || |||| | ||||| ||||||| || | Sbjct 61650 TTAAGTGCTAATCCTACTACTCCAAGTGCT-GACATCCATA-ACCCAGTAACAGGTACGA 61707 Query 6501 ACAGCATAAAGAAATGTAGCCAACGCTTATTGCTGAAGGCGATACCAAAGATCTGAGACC 6560 | ||||| ||||| || ||||||||||| || ||| || | ||| || ||||| |||| Sbjct 61708 AGAGCATGAAGAAGTGAAGCCAACGCTTGTTTGAGAAAGCTACACCGAAAATCTGTGACC 61767 Query 6561 AGAAACGATTAGCCGTGACCATCGAATAGGTCTCCTCTTCTTGTGTAGGCTCAAACGCCT 6620 ||||||| |||||||| ||||| || || ||||| ||| |||| || || | || || Sbjct 61768 AGAAACGGTTAGCCGTTACCATTGAGTAAGTCTCTTCTGCTTGAGTTGGGTTGAATGCAC 61827 Query 6621 TGAAAGTATTTGATTGTTCACCATCTTCAAACAAAGTATTCTCTACAGTAGCACCGTGAA 6680 ||| || ||||| ||||||||||| || | || ||||||||||| || ||||||| Sbjct 61828 GGAATGTGTTTGAACCATCACCATCTTCGAAAAGTGTGTTCTCTACAGTTGCTCCGTGAA 61887 Query 6681 TAGCACAGAGCAATGCTCCACCTAAGATACCTGCTACACCCATCATATGAAACGGGTTGA 6740 | ||||| || | |||| |||| | | ||| ||||| |||||||| || || ||||| | Sbjct 61888 TTGCACAAAGAAGTGCTGCACCGAGTACACCAGCTACTCCCATCATGTGGAATGGGTTAA 61947 Query 6741 GCGTCCAGTTGTGGAAGCCCTGTAGGAAGAGTAAGAAGCGGAATATCGCTGCAACACCAA 6800 | |||||||||||||| || || | ||| || | || ||||| || | || ||||||| Sbjct 61948 GTGTCCAGTTGTGGAAACCTTGGAAGAAAAGAATAAAACGGAAAATTCCAGCTACACCAA 62007 Query 6801 ACGACGGCGCAAAGAACCAACTGGACTGTCCGAGAGGATACATGAGAAAGACAGACACAA 6860 | || || ||||||||||||| || || || || || || || || || ||||| |||| Sbjct 62008 ATGATGGTGCAAAGAACCAACCTGATTGCCCAAGTGGGTAAATAAGGAATACAGATACAA 62067 Query 6861 AGACAGCAATGGGACCAGAAAACGCGATTGCATTGTAGGGACGAATACCGACTAGACGTG 6920 | |||||||| || | || || || || || ||||| |||||||| ||| ||| | Sbjct 62068 ACACAGCAATTGGTGCTGAGAATGCAATCGCGTTGTATGGACGAATTTGTACTGCACGAG 62127 Query 6921 CGATCTCAAACTGCCGAAGCATGAAACCTATAAGGGCAAAGGCTCCGTGGAGCGCCACAA 6980 | || ||||| || |||||||| || || || | |||| |||||||| || || || | Sbjct 62128 CAATTTCAAATTGACGAAGCATAAATCCGATTAATCCAAATGCTCCGTGAAGAGCTACGA 62187 Query 6981 AAGGCCATAGTCCCCCAAGTTGGAGCCAGCGGACGAAATCTCCCTGAGCTTCTGGACCCC 7040 | | ||||| ||| |||||||| ||| || ||| || || || |||||||| |||| Sbjct 62188 ATGTCCATAATCCACCAAGTTGACACCAACGTGTGAAGTCACCTTGTGCTTCTGGTCCCC 62247 Query 7041 ATAGAAGAAGTAGGGAATGTCCGAGAGCGTCAGCAGGAGTTGATACAGCAGCAGTAAGGA 7100 | || ||||| || || ||| | | |||| | || |||||||| || | ||| |||| Sbjct 62248 AAAGGAGAAGAAGTGAGTGTGCCATCGCGTTTGATGGCGTTGATACTGCTGAAGTGAGGA 62307 Query 7101 AATTACATCCCTCAAGATACGAAGAAGCAATCCCGTGAGTGTACCAGCTCGTGACGAAAG 7160 | ||||| || ||||| || ||| || | ||||| |||||||| || ||||| | Sbjct 62308 AGTTACACCCTTCAAGGTATGAACTTGCTAAACCGTGTGTGTACCATGAAGTTACGAATG 62367 Query 7161 TTGTGCCCGTGAGCCAACCGCCCAGTGCCAGGTAAGCAGTAGGGAACAGAAGAAGACCTG 7220 |||| || || ||||| || || ||||| | ||| ||| ||||| | | ||| || | Sbjct 62368 TTGTTCCAGTAAGCCATCCACCAAGTGCAAAGTATGCACATGGGAATAATAAAAGTCCAG 62427 Query 7221 ACCAACCAACAAAAACGAACCTATCACGCTTAAGCCAGTCATC 7263 ||||||| || || ||||| | |||||||||||||||||||| Sbjct 62428 ACCAACCTACGAATACGAAACGGTCACGCTTAAGCCAGTCATC 62470 Score = 93.3 bits (102), Expect = 5e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 176133 GGATTTGAACCCCCGTAGGCAGAGCCAGCGGATTTACAGTCCGCCTCCATTAACCACTCG 176192 ||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 44374 GGATTTGAACCAGTGTAGGCAAAGCCAGCGGATTTACAGTCCGCCCCCATTAACCACTCG 44433 Query 176193 GACACCTACCC 176203 | || | |||| Sbjct 44434 GGCATCGACCC 44444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622124636692240